RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 FBXL14Q8N1E6 418 aa13□□□□□ -0.33
VPS36-207ENST00000611132 NANOS1Q8WY41 292 aaKnown RBP13□□□□□ -0.33
VPS36-207ENST00000611132 SPSB1Q96BD6 273 aa13□□□□□ -0.33
VPS36-207ENST00000611132 FAAP24Q9BTP7 215 aa13□□□□□ -0.33
VPS36-207ENST00000611132 DHHO43323 396 aa13□□□□□ -0.33
VPS36-207ENST00000611132 ABHD16AO95870 558 aa13□□□□□ -0.33
VPS36-207ENST00000611132 GAPDHP04406 335 aaKnown RBP13□□□□□ -0.33
VPS36-207ENST00000611132 PGA3P0DJD8 388 aa13□□□□□ -0.33
VPS36-207ENST00000611132 GPR3P46089 330 aa13□□□□□ -0.33
VPS36-207ENST00000611132 RNF4P78317 190 aa13□□□□□ -0.33
VPS36-207ENST00000611132 FUT7Q11130 342 aa13□□□□□ -0.33
VPS36-207ENST00000611132 CEBPEQ15744 281 aa13□□□□□ -0.33
VPS36-207ENST00000611132 HOGA1Q86XE5 327 aa13□□□□□ -0.33
VPS36-207ENST00000611132 OR8U1Q8NH10 309 aa13□□□□□ -0.33
VPS36-207ENST00000611132 REEP6Q96HR9 211 aa13□□□□□ -0.33
VPS36-207ENST00000611132 PECRQ9BY49 303 aa13□□□□□ -0.33
VPS36-207ENST00000611132 VN1R1Q9GZP7 353 aa13□□□□□ -0.33
VPS36-207ENST00000611132 SLC26A1Q9H2B4 701 aa13□□□□□ -0.33
VPS36-207ENST00000611132 CARHSP1Q9Y2V2 147 aaKnown RBP13□□□□□ -0.33
VPS36-207ENST00000611132 LIPGQ9Y5X9 500 aa13□□□□□ -0.33
VPS36-207ENST00000611132 C4orf47A7E2U8 309 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 YIF1AO95070 293 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 TBX6O95947 436 aaPredicted RBP12.99□□□□□ -0.33
VPS36-207ENST00000611132 P2RY1P47900 373 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 NKAIN1Q4KMZ8 207 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 MCHR2Q969V1 340 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 SHDQ96IW2 340 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 CDH20Q9HBT6 801 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 MOSPD3O75425 235 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 BGLAPP02818 100 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 ACKR3P25106 362 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 OTX2P32243 289 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 FAM3AP98173 230 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 MYBPHQ13203 477 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 COL13A1Q5TAT6 717 aaPredicted RBP12.99□□□□□ -0.33
VPS36-207ENST00000611132 FGF14Q92915 247 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 J3QRE1 110 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 PNPP00491 289 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 HOXC4P09017 264 aaPredicted RBP12.99□□□□□ -0.33
VPS36-207ENST00000611132 HLA-DOBP13765 273 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 LIMK1P53667 647 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 VAX1Q5SQQ9 334 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 UHRF2Q96PU4 802 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 ADAM19Q9H013 955 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 ANXA10Q9UJ72 324 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 CA14Q9ULX7 337 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 GPR132Q9UNW8 380 aa12.99□□□□□ -0.33
VPS36-207ENST00000611132 A0A1B0GTQ1 180 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 DHRS3O75911 302 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 IAPPP10997 89 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 OR2B11Q5JQS5 317 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 ADAT3Q96EY9 351 aaPredicted RBP12.98□□□□□ -0.33
VPS36-207ENST00000611132 AQP10Q96PS8 301 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 LMAN1LQ9HAT1 526 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 MYOZ1Q9NP98 299 aaPredicted RBP12.98□□□□□ -0.33
VPS36-207ENST00000611132 CDRT15L2A8MXV6 281 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 G0S2P27469 103 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 LPAR6P43657 344 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 MESP2Q0VG99 397 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 C1orf100Q5SVJ3 147 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 DGAT2L6Q6ZPD8 337 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 SLC25A26Q70HW3 274 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 OR8B12Q8NGG6 310 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 RNF133Q8WVZ7 376 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 TMEM37Q8WXS4 190 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 TM4SF19Q96DZ7 209 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 SHISA8B8ZZ34 492 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 H3BQ15 152 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 CD74P04233 296 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 CARD18P57730 90 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 UBE2NP61088 152 aaKnown RBP12.98□□□□□ -0.33
VPS36-207ENST00000611132 INTS12Q96CB8 462 aaKnown RBP12.98□□□□□ -0.33
VPS36-207ENST00000611132 TXN2Q99757 166 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 RLFQ13129 1914 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 MYOGP15173 224 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 ROM1Q03395 351 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 IQCJQ1A5X6 159 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 SLC26A10Q8NG04 563 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 ASB10Q8WXI3 467 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 RYDENQ9NUL5 291 aaKnown RBP12.98□□□□□ -0.33
VPS36-207ENST00000611132 PSENENQ9NZ42 101 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 HDGFL3Q9Y3E1 203 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 CBY1Q9Y3M2 126 aa12.98□□□□□ -0.33
VPS36-207ENST00000611132 SCN2AQ99250 2005 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 BRWD1Q9NSI6 2320 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 FUT3P21217 361 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 GDF1P27539 372 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 INSM1Q01101 510 aaPredicted RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 C20orf196Q8IYI0 205 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 ADAMTS17Q8TE56 1095 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 HIST1H2BAQ96A08 127 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 OR6C1Q96RD1 312 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 OSGIN2Q9Y236 505 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 SPTY2D1-AS1A0A0U1RR47 76 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 CSNK1EP49674 416 aaKnown RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 DLK1P80370 383 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 PNRC1Q12796 327 aaPredicted RBP12.97□□□□□ -0.33
VPS36-207ENST00000611132 Q3ZCU0 254 aa12.97□□□□□ -0.33
VPS36-207ENST00000611132 ARTNQ5T4W7 220 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms