RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 KIR2DS1Q14954 304 aa7.84□□□□□ -1.15
CSMD1-216ENST00000602557 OR2M7Q8NG81 312 aa7.84□□□□□ -1.15
CSMD1-216ENST00000602557 OBP2AQ9NY56 170 aa7.84□□□□□ -1.15
CSMD1-216ENST00000602557 A0A1W2PR80 420 aa7.84□□□□□ -1.16
CSMD1-216ENST00000602557 OR5B21A6NL26 309 aa7.84□□□□□ -1.16
CSMD1-216ENST00000602557 HLA-DRB5Q30154 266 aa7.84□□□□□ -1.16
CSMD1-216ENST00000602557 METRNLQ641Q3 311 aa7.84□□□□□ -1.16
CSMD1-216ENST00000602557 OR5D13Q8NGL4 314 aa7.84□□□□□ -1.16
CSMD1-216ENST00000602557 ADGRG7Q96K78 797 aa7.84□□□□□ -1.16
CSMD1-216ENST00000602557 ING1Q9UK53 422 aaPredicted RBP7.84□□□□□ -1.16
CSMD1-216ENST00000602557 GREB1Q4ZG55 1949 aa7.84□□□□□ -1.16
CSMD1-216ENST00000602557 MPC2O95563 127 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 CCL11P51671 97 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 RTL8BQ17RB0 113 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 B3GNTL1Q67FW5 361 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 OR10A7Q8NGE5 316 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 MARCH5Q9NX47 278 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 ADPRHP54922 357 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 SSX1Q16384 188 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 ZNF385BQ569K4 471 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 ELFN2Q5R3F8 820 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 UBE3DQ7Z6J8 389 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 MARVELD1Q9BSK0 173 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 HMSDA8MTL9 139 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 ICOSLGO75144 302 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 TMIGD3P0DMS9 266 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 GLRA1P23415 457 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 DND1Q8IYX4 353 aaKnown RBP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 SLC37A2Q8TED4 501 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 HGDQ93099 445 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 Q9N2K0 584 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 AURKAIP1Q9NWT8 199 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 TBC1D29Q9UFV1 150 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 TBPP20226 339 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 RPS27P42677 84 aaKnown RBP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 UBTD1Q9HAC8 227 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 GPR84Q9NQS5 396 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 FOXJ3Q9UPW0 622 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 CRYM-AS1A6NIL9 109 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 KLRC4-KLRK1H3BQV0 150 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 STAG3L2P0CL84 134 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 POLR2GP62487 172 aaKnown RBP eCLIP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 TRMT12Q53H54 448 aaKnown RBP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 PRAMEF5Q5TYX0 476 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 PRAMEF6Q5VXH4 476 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 YRDCQ86U90 279 aaKnown RBP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 KCNK15Q9H427 330 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 SIRT5Q9NXA8 310 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 SIT1Q9Y3P8 196 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 A0A1W2PR48 441 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 GAGE10A6NGK3 116 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 NRG2O14511 850 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 IGHEP01854 428 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 ROBO4Q8WZ75 1007 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 TEAD3Q99594 435 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 ZNF426Q9BUY5 554 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 DUXBA0A1W2PPF3 345 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 C5orf49A4QMS7 147 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 OR4C46A6NHA9 309 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 ZNF628Q5EBL2 1059 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 SHARPINQ9H0F6 387 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 A4GNTQ9UNA3 340 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 ASB1Q9Y576 335 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 COL16A1Q07092 1604 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 SIPA1L3O60292 1781 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 CLEC18AA5D8T8 446 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 SIRPB1O00241 398 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 DSCR3O14972 297 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 MMP9P14780 707 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 CSN1S1P47710 185 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 HIST3H3Q16695 136 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 PET117Q6UWS5 81 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 CLEC18CQ8NCF0 446 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 OR5AU1Q8NGC0 362 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 ASB16Q96NS5 453 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 PITPNC1Q9UKF7 332 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 MYOGP15173 224 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 COX5AP20674 150 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 APOBEC1P41238 236 aaKnown RBP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 SUB1P53999 127 aaKnown RBP eCLIP7.83□□□□□ -1.16
CSMD1-216ENST00000602557 TMEM229BQ8NBD8 167 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 GGACTQ9BVM4 153 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 DMRT1Q9Y5R6 373 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 LNP1A1A4G5 178 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 ACER2Q5QJU3 275 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 FAHD1Q6P587 224 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 FAM174AQ8TBP5 190 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 RDH5Q92781 318 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 SLC35E1Q96K37 410 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 TMPRSS13Q9BYE2 586 aa7.83□□□□□ -1.16
CSMD1-216ENST00000602557 NEURL1O76050 574 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 OR5G3P0C626 314 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 CRISP2P16562 243 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 SLC37A1P57057 533 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 OR13H1Q8NG92 308 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 ERGIC1Q969X5 290 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 SLAMF6Q96DU3 332 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 TMEM272A0A1B0GTI8 110 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 HAND1O96004 215 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 RPL18Q07020 188 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms