RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 PNLIPRP1P54315 467 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 RIPPLY3P57055 190 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 FOXL2P58012 376 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 S100A10P60903 97 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 RPS16P62249 146 aaKnown RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 RPL23AP62750 156 aaKnown RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 CSNK2A1P68400 391 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 BTN3A2P78410 334 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 ENDOGQ14249 297 aaKnown RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 OR7A5Q15622 319 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 CEBPEQ15744 281 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 CDO1Q16878 200 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 ARHGAP11BQ3KRB8 267 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 TMEM41BQ5BJD5 291 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 TMEM69Q5SWH9 247 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 DCST1Q5T197 706 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 TPTE2P1Q5T6R2 138 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 COX15Q7KZN9 410 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 SERPINA9Q86WD7 417 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 GKN2Q86XP6 184 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 CALHM1Q8IU99 346 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 DND1Q8IYX4 353 aaKnown RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 CSNK2A3Q8NEV1 391 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 OR5A2Q8NGI9 324 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 OR10G4Q8NGN3 311 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF519Q8TB69 540 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 ALG14Q96F25 216 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 DYNLL2Q96FJ2 89 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 GUCD1Q96NT3 240 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 MS4A10Q96PG2 267 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 BBC3Q96PG8 261 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 CD180Q99467 661 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 PYGO2Q9BRQ0 406 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 MED10Q9BTT4 135 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 RAB11FIP5Q9BXF6 653 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 P2RY12Q9H244 342 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 MFSD1Q9H3U5 465 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 METTL7AQ9H8H3 244 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 NUDT4Q9NZJ9 180 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 C11orf21Q9P2W6 132 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 SERTAD3Q9UJW9 196 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 FUT9Q9Y231 359 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 NOP16Q9Y3C1 178 aaKnown RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 CCL27Q9Y4X3 112 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 YIPF1Q9Y548 306 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 OR51B2Q9Y5P1 312 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 CSAG2Q9Y5P2 127 aa5.35□□□□□ -1.55
SMAD4-203ENST00000585448 POLR2AP24928 1970 aaKnown RBP5.35□□□□□ -1.55
SMAD4-203ENST00000585448 COL5A2P05997 1499 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-203ENST00000585448 A0A1W2PPV4 95 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 SLC33A1O00400 549 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-203ENST00000585448 PIRO00625 290 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 TLX3O43711 291 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-203ENST00000585448 TBX19O60806 448 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 ECI2O75521 394 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 CNMDO75829 334 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 LRATO95237 230 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 MMP2P08253 660 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 DPP4P27487 766 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 CMPK1P30085 196 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 DCTDP32321 178 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 P2RY2P41231 377 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 PGGT1BP53609 377 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 OR12D2P58182 307 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 FAM3BP58499 235 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-203ENST00000585448 TBPL1P62380 186 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF154Q13106 437 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 ATXN7L3Q14CW9 347 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-203ENST00000585448 SLC25A35Q3KQZ1 300 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 LRRC10Q5BKY1 277 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 TRNP1Q6NT89 227 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 WDR74Q6RFH5 385 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-203ENST00000585448 TMEM205Q6UW68 189 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 TMEM207Q6UWW9 146 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 RBM45Q8IUH3 476 aaKnown RBP5.34□□□□□ -1.55
SMAD4-203ENST00000585448 TUSC5Q8IXB3 177 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 C4orf19Q8IY42 314 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 YAF2Q8IY57 180 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF101Q8IZC7 436 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 C10orf111Q8N326 155 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 CHST4Q8NCG5 386 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 OR4K14Q8NGD5 310 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 OR51L1Q8NGJ5 315 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 OR51A2Q8NGJ7 313 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 OR4C16Q8NGL9 310 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 OR5AK3PQ8NH89 298 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 SUN3Q8TAQ9 357 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 DNAJB3Q8WWF6 145 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 RLN3Q8WXF3 142 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 APH1AQ96BI3 265 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 SARAFQ96BY9 339 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 SLAMF6Q96DU3 332 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 MRAP2Q96G30 205 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 PRRC1Q96M27 445 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 FER1L6-AS2Q96M78 137 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 ZNF649Q9BS31 505 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 NIPSNAP3BQ9BS92 247 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 SLC39A8Q9C0K1 460 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 CHST8Q9H2A9 424 aa5.34□□□□□ -1.55
SMAD4-203ENST00000585448 OR52D1Q9H346 318 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms