RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 NDUFS5O43920 106 aa2.7□□□□□ -1.98
LINC00557-201ENST00000563184 IGKV1D-16P01601 117 aa2.7□□□□□ -1.98
LINC00557-201ENST00000563184 MAPRE2Q15555 327 aa2.7□□□□□ -1.98
LINC00557-201ENST00000563184 FAM27D1Q5T7N8 215 aa2.7□□□□□ -1.98
LINC00557-201ENST00000563184 ARHGAP18Q8N392 663 aa2.7□□□□□ -1.98
LINC00557-201ENST00000563184 DDIT4Q9NX09 232 aa2.7□□□□□ -1.98
LINC00557-201ENST00000563184 ELP1O95163 1332 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 OTCP00480 354 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 PFN1P07737 140 aaKnown RBP2.69□□□□□ -1.98
LINC00557-201ENST00000563184 INAFM2P0DMQ5 153 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 MEF2CQ06413 473 aaPredicted RBP2.69□□□□□ -1.98
LINC00557-201ENST00000563184 ZNF235Q14590 738 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 NDUFAF6Q330K2 333 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 TTC32Q5I0X7 151 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 DUPD1Q68J44 220 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 PRNTQ86SH4 94 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 FAM57AQ8TBR7 257 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 ZFAND1Q8TCF1 268 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 CENPNQ96H22 339 aaPredicted RBP2.69□□□□□ -1.98
LINC00557-201ENST00000563184 DERL3Q96Q80 235 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 SPACA5Q96QH8 159 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 STX18Q9P2W9 335 aaKnown RBP2.69□□□□□ -1.98
LINC00557-201ENST00000563184 TFR2Q9UP52 801 aa2.69□□□□□ -1.98
LINC00557-201ENST00000563184 CHTOPQ9Y3Y2 248 aaKnown RBP2.69□□□□□ -1.98
LINC00557-201ENST00000563184 SETD1AO15047 1707 aaKnown RBP2.68□□□□□ -1.98
LINC00557-201ENST00000563184 FAM240AA0A1B0GVK7 77 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 IZUMO1RA6ND01 250 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 OR6C70A6NIJ9 312 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 IGKV4-1P06312 121 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 OR5AC1P0C628 307 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 CD9P21926 228 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 RGS6P49758 472 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 IFFO1Q0D2I5 559 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 WDR43Q15061 677 aaKnown RBP eCLIP2.68□□□□□ -1.98
LINC00557-201ENST00000563184 CDNFQ49AH0 187 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 SETD3Q86TU7 594 aaPredicted RBP2.68□□□□□ -1.98
LINC00557-201ENST00000563184 LRRC8AQ8IWT6 810 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 NDNFQ8TB73 568 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 TNFRSF14Q92956 283 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 YIPF6Q96EC8 236 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 IFNKQ9P0W0 207 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 HMGXB4Q9UGU5 601 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 CFL2Q9Y281 166 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 ORC6Q9Y5N6 252 aa2.68□□□□□ -1.98
LINC00557-201ENST00000563184 NPHP4O75161 1426 aaPredicted RBP2.68□□□□□ -1.98
LINC00557-201ENST00000563184 A0A0J9YYE9 177 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 A0A1W2PNN7 141 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 M0R1B8 84 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 UPK1AO00322 258 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 ALOX12BO75342 701 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 TRBC1P01850 177 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 OR5AL1P0C617 328 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 OR4Q2P0C623 313 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 SEC11BP0C7V7 166 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 P0C880 135 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 HLA-GP17693 338 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 P2RY2P41231 377 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 PSMB2P49721 201 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 OR12D2P58182 307 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 TAS2R60P59551 318 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 ATP5G2Q06055 141 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 LAMTOR4Q0VGL1 99 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 DYNC1I2Q13409 638 aaKnown RBP2.67□□□□□ -1.98
LINC00557-201ENST00000563184 BRD3OSQ6XYD6 125 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 ADM2Q7Z4H4 148 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 ITPRIPQ8IWB1 547 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 ZFP62Q8NB50 900 aaPredicted RBP2.67□□□□□ -1.98
LINC00557-201ENST00000563184 OR4K2Q8NGD2 314 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 ORAOV1Q8WV07 137 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 CACNG8Q8WXS5 425 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 FAM131CQ96AQ9 280 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 ZBED3Q96IU2 234 aaPredicted RBP2.67□□□□□ -1.98
LINC00557-201ENST00000563184 PORCNQ9H237 461 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 GAL3ST2Q9H3Q3 398 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 C6orf50Q9HD87 102 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 FAM60AQ9NP50 221 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 LZTFL1Q9NQ48 299 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 ZNF229Q9UJW7 825 aa2.67□□□□□ -1.98
LINC00557-201ENST00000563184 ANKRD20A5PA0PJZ0 165 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 H7C2Y5 167 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 STAG3L2P0CL84 134 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 HOXB8P17481 243 aaPredicted RBP2.66□□□□□ -1.98
LINC00557-201ENST00000563184 CD34P28906 385 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 BAMBIQ13145 260 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 PMVKQ15126 192 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 TAL2Q16559 108 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 THOC7Q6I9Y2 204 aaKnown RBP2.66□□□□□ -1.98
LINC00557-201ENST00000563184 FA2HQ7L5A8 372 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 NT5DC3Q86UY8 548 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 NT5CQ8TCD5 201 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 RNF170Q96K19 258 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 TMED9Q9BVK6 235 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 MAP1LC3CQ9BXW4 147 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 COA1Q9GZY4 146 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 RDH14Q9HBH5 336 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 ZNF302Q9NR11 478 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 ZNF492Q9P255 531 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 ZNF391Q9UJN7 358 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 FLVCR2Q9UPI3 526 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 KLF13Q9Y2Y9 288 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms