RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SLC17A1Q14916 467 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 USF2Q15853 346 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 ODF4Q2M2E3 257 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 HLA-BQ31612 363 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 SOHLH1Q5JUK2 328 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 PMS2CLQ68D20 193 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 RPUSD3Q6P087 351 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 UNQ6494/PRO21346Q6UXR6 183 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 LRRC69Q6ZNQ3 347 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 SUMF2Q8NBJ7 301 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 ASB5Q8WWX0 329 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 ST8SIA1Q92185 356 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 TMEM230Q96A57 120 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 C5orf34Q96MH7 638 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 GNRHR2Q96P88 292 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 AMELYQ99218 206 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 PLEKHA2Q9HB19 425 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 C19orf12Q9NSK7 152 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 SUSD2Q9UGT4 822 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 AMDHD2Q9Y303 409 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 BORCS7-ASMTA0A0B4J1R7 106 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 IGLV1-36A0A0B4J1U3 117 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 SMCO3A2RU48 225 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 FIGNL2A6NMB9 653 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 DVL1O14640 695 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 SOD3P08294 240 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 SPARCP09486 303 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 CAMLGP49069 296 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 CASP6P55212 293 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 SUMO3P55854 103 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 S100A10P60903 97 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 ZNF616Q08AN1 781 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 OR8G1Q15617 311 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 SPNS3Q6ZMD2 512 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 Q7L0L9 218 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 PEG10Q86TG7 708 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 BHLHE23Q8NDY6 225 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 OR10AD1Q8NGE0 317 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 RNF138Q8WVD3 245 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 RELTQ969Z4 430 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 PRO1933Q9H354 126 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 NME2P1O60361 137 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 SLC16A7O60669 478 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 IL11P20809 199 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 FCGR2CP31995 323 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 ELOBQ15370 118 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 HIKESHIQ53FT3 197 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 ZNF679Q8IYX0 411 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 OR4K15Q8NH41 348 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 RNASEH2CQ8TDP1 164 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 SLC25A44Q96H78 314 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 OR10C1Q96KK4 312 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 FOXN4Q96NZ1 517 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 GPR61Q9BZJ8 451 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 C5orf66Q9H5L9 145 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 ELOVL3Q9HB03 270 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 MRPL22Q9NWU5 206 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 CGGBP1Q9UFW8 167 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 WASF3Q9UPY6 502 aa12.29□□□□□ -0.44
RABGGTA-220ENST00000560998 ADAMTS9Q9P2N4 1935 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 HLA-DQA2P01906 255 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 HCKP08631 526 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 CTLA4P16410 223 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 ZNF708P17019 499 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 DNASE1L1P49184 302 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 ROM1Q03395 351 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 SLC9A3R2Q15599 337 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 AKR1C8PQ5T2L2 129 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 OTPQ5XKR4 325 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 LCN10Q6JVE6 187 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 CPEB2Q7Z5Q1 589 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 WDR5BQ86VZ2 330 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 JAGN1Q8N5M9 183 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 GVQW1Q8N7I0 195 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 OR8G5Q8NG78 346 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 HPSE2Q8WWQ2 592 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 R3HDM4Q96D70 268 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 PACRGQ96M98 296 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 GINS3Q9BRX5 216 aa12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 COLQQ9Y215 455 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-220ENST00000560998 DEDDO75618 318 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 BPNT1O95861 308 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 APOBEC1P41238 236 aaKnown RBP12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 TNFRSF9Q07011 255 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 JOSD1Q15040 202 aaPredicted RBP12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 ANKRD55Q3KP44 614 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 SLC18B1Q6NT16 456 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 LYPD6Q86Y78 171 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 CHST4Q8NCG5 386 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 OR5L2Q8NGL0 311 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 RHBDD1Q8TEB9 315 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 Q8WTZ3 238 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 NELFAQ9H3P2 528 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 FBLN5Q9UBX5 448 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 MMP24Q9Y5R2 645 aa12.27□□□□□ -0.44
RABGGTA-220ENST00000560998 CCDC187A0A096LP49 1063 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 WIPF3A6NGB9 483 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 C9J4A7 227 aa12.27□□□□□ -0.45
RABGGTA-220ENST00000560998 MS4A18H0YCH9 400 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms