RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 OR8B8Q15620 311 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 PIGYQ3MUY2 71 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 CHRFAM7AQ494W8 412 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 NRN1LQ496H8 165 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 ACTBL2Q562R1 376 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 C3P1Q6ZMU1 363 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 LHFPL2Q6ZUX7 228 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 FAM117AQ9C073 453 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 PRR13Q9NZ81 148 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 PRSS50Q9UI38 385 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 ZNF391Q9UJN7 358 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 ZNF850A8MQ14 1090 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 LEUTXA8MZ59 168 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 XRCC2O43543 280 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 PDCD1Q15116 288 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 MED12LQ86YW9 2145 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 MFFQ9GZY8 342 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 SLC7A11Q9UPY5 501 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 ZFHX4Q86UP3 3567 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 RFPL4AA6NLU0 287 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 FIGNL2A6NMB9 653 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 ZNF724A8MTY0 619 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 RFPL4AL1F8VTS6 287 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 RPL36A-HNRNPH2H7BZ11 118 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 SFTPBP07988 381 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 CCL11P51671 97 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 RRADP55042 308 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 DYRK2Q92630 601 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 PRDM14Q9GZV8 571 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 ZNF552Q9H707 407 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-204ENST00000543140 SPRR3Q9UBC9 169 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 GPR160Q9UJ42 338 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 GPR132Q9UNW8 380 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 CFAP47Q6ZTR5 3102 aa14.13□□□□□ -0.15
COL4A1-204ENST00000543140 ZNF816-ZNF321PA0A0X1KG74 233 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 RPS10-NUDT3A0A1W2PQS6 291 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 GEMIN2O14893 280 aaKnown RBP14.12□□□□□ -0.15
COL4A1-204ENST00000543140 TAS2R46P59540 309 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 RAB1AP62820 205 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 ATXN7L3Q14CW9 347 aaPredicted RBP14.12□□□□□ -0.15
COL4A1-204ENST00000543140 RNPS1Q15287 305 aaKnown RBP14.12□□□□□ -0.15
COL4A1-204ENST00000543140 SLC9A3R2Q15599 337 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 AADACL3Q5VUY0 350 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 FAHD2BQ6P2I3 314 aaPredicted RBP14.12□□□□□ -0.15
COL4A1-204ENST00000543140 GLRX5Q86SX6 157 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 ZNF546Q86UE3 836 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 CALHM1Q8IU99 346 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 FBXL14Q8N1E6 418 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 OR5AP2Q8NGF4 316 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 EMG1Q92979 244 aaKnown RBP14.12□□□□□ -0.15
COL4A1-204ENST00000543140 CPNE2Q96FN4 548 aaPredicted RBP14.12□□□□□ -0.15
COL4A1-204ENST00000543140 FAHD2AQ96GK7 314 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 PPA2Q9H2U2 334 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 ACKR4Q9NPB9 350 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 TRGV5A0A0B4J1U4 118 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 EEF1E1-BLOC1S5C9J1V9 151 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 DUS4LO95620 317 aaKnown RBP14.12□□□□□ -0.15
COL4A1-204ENST00000543140 ACTL6AO96019 429 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 ATP1B3P54709 279 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 PDZK1IP1Q13113 114 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 RPUSD3Q6P087 351 aaKnown RBP14.12□□□□□ -0.15
COL4A1-204ENST00000543140 OR56B2PQ8NGI1 322 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 OR51F2Q8NH61 342 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 TMEM230Q96A57 120 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 PAPOLGQ9BWT3 736 aaKnown RBP14.12□□□□□ -0.15
COL4A1-204ENST00000543140 CRIM1Q9NZV1 1036 aa14.12□□□□□ -0.15
COL4A1-204ENST00000543140 C13orf42A0A1B0GVH6 325 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 MSTNO14793 375 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 NGFP01138 241 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 CD8AP01732 235 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 GLRA1P23415 457 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 OPRM1P35372 400 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 FUT6P51993 359 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 TMEM128Q5BJH2 165 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 ALKAL2Q6UX46 152 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 COLCA1Q6ZS62 124 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 TMEM17Q86X19 198 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 ZSCAN4Q8NAM6 433 aaPredicted RBP14.11□□□□□ -0.15
COL4A1-204ENST00000543140 PPP1R1CQ8WVI7 109 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 SPSB4Q96A44 273 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 WDYHV1Q96HA8 205 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 COMMD9Q9P000 198 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 ZNF629Q9UEG4 869 aaPredicted RBP14.11□□□□□ -0.15
COL4A1-204ENST00000543140 AK3Q9UIJ7 227 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 FAM221AA4D161 298 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 OR6C65A6NJZ3 312 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 CDRT15L2A8MXV6 281 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 RP2O75695 350 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 RAB14P61106 215 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 HIKESHIQ53FT3 197 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 OVCH2Q7RTZ1 564 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 ASB13Q8WXK3 278 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 SULT4A1Q9BR01 284 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 RTBDNQ9BSG5 229 aaPredicted RBP14.11□□□□□ -0.15
COL4A1-204ENST00000543140 OR51B6Q9H340 312 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 RDH8Q9NYR8 311 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 ARID1AO14497 2285 aa14.11□□□□□ -0.15
COL4A1-204ENST00000543140 LINC00862A6NCI5 91 aa14.1□□□□□ -0.15
COL4A1-204ENST00000543140 C5orf51A6NDU8 294 aa14.1□□□□□ -0.15
COL4A1-204ENST00000543140 ZNF205O95201 554 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms