RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 PDFQ9HBH1 243 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 LINC01553A4QN01 128 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 CAPZBP47756 277 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 MOB3BQ86TA1 216 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 ZDHHC22Q8N966 263 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 PP6455Q8WZ26 134 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 ORAI1Q96D31 301 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 TRMT61AQ96FX7 289 aaKnown RBP8.93□□□□□ -0.98
COL4A6-208ENST00000538570 SLC35B3Q9H1N7 401 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 ASB1Q9Y576 335 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 SMPD2O60906 423 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 FAHP16930 419 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 CCR5P51681 352 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 OTPQ5XKR4 325 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 OCIAD1Q9NX40 245 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 A4GNTQ9UNA3 340 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 LIPGQ9Y5X9 500 aa8.93□□□□□ -0.98
COL4A6-208ENST00000538570 NWD2Q9ULI1 1742 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 ZGLP1P0C6A0 271 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 NHLH1Q02575 133 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 PLA1AQ53H76 456 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 MYPOPQ86VE0 399 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-208ENST00000538570 NTNG2Q96CW9 530 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 EIF3GO75821 320 aaKnown RBP eCLIP8.92□□□□□ -0.98
COL4A6-208ENST00000538570 CST4P01036 141 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 HINT1P49773 126 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-208ENST00000538570 TMEM267Q0VDI3 215 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-208ENST00000538570 FOXF1Q12946 379 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 ALKBH6Q3KRA9 238 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 DPPA3Q6W0C5 159 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 TRILQ7L0X0 811 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 OR2V1Q8NHB1 315 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 WBP2Q969T9 261 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 APOBEC3DQ96AK3 386 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-208ENST00000538570 EDIL3O43854 480 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 BMP5P22003 454 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 SKP2Q13309 424 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 LRRC10Q5BKY1 277 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 PRSS36Q5K4E3 855 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 TMEM56Q96MV1 263 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 PRRX2Q99811 253 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 RHNO1Q9BSD3 238 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 RSG1Q9BU20 258 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 UQCC1Q9NVA1 299 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 FBXO4Q9UKT5 387 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 MFSD2BA6NFX1 497 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 MASP2O00187 686 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 DNPH1O43598 174 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 ONECUT2O95948 504 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 RBP4P02753 201 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 COMPP49747 757 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-208ENST00000538570 KIRREL2Q6UWL6 708 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 GPR137Q96N19 417 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 FOXJ2Q9P0K8 574 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 LRP12Q9Y561 859 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 MBTPS2O43462 519 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 GYPAP02724 150 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 FUT3P21217 361 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 CDAP32320 146 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 MYBPHQ13203 477 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 DDA1Q9BW61 102 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 NAT8BQ9UHF3 227 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 PITPNC1Q9UKF7 332 aa8.92□□□□□ -0.98
COL4A6-208ENST00000538570 AVPR2P30518 371 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 OR4F17Q8NGA8 305 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 KISS1RQ969F8 398 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-208ENST00000538570 MFRPQ9BY79 579 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 SLC17A5Q9NRA2 495 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 LINC00862A6NCI5 91 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 NDUFB3O43676 98 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 ARG1P05089 322 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 PTGFRP43088 359 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 DSCR4P56555 118 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-208ENST00000538570 FAM53BQ14153 422 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 IGFBP7Q16270 282 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 Q56UQ5 140 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 CST9Q5W186 159 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 BTNL3Q6UXE8 466 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 Q8IYB0 196 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 NT5CQ8TCD5 201 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 ISOC2Q96AB3 205 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 TMEM147Q9BVK8 224 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 LOXL2Q9Y4K0 774 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 A0A0B4J293 547 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 GOSR1O95249 250 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 GPANK1O95872 356 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 GLULP15104 373 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 GABRA6Q16445 453 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 OTOSQ8NHW6 89 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 TTC9Q92623 222 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 ZDHHC16Q969W1 377 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 SPSB1Q96BD6 273 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 PIMREGQ9BSJ6 248 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 TMED3Q9Y3Q3 217 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 WSB1Q9Y6I7 421 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 PKD1L3Q7Z443 1732 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 A0A087WUJ7 227 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 SLC25A5P05141 298 aaKnown RBP8.91□□□□□ -0.98
COL4A6-208ENST00000538570 PGA3P0DJD8 388 aa8.91□□□□□ -0.98
COL4A6-208ENST00000538570 CD200P41217 278 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms