RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CCDC90BQ9GZT6 254 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 DNTTIP1Q9H147 329 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 RASSF4Q9H2L5 321 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR51I2Q9H344 312 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZCCHC4Q9H5U6 513 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 C7orf69Q9H7B7 122 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 METTL17Q9H7H0 456 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 PPP1R3EQ9H7J1 279 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 NLKQ9UBE8 527 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 GLS2Q9UI32 602 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF281Q9Y2X9 895 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 ITPR3Q14573 2671 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 LOC105371242A0A075B767 164 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 IGHV2-70DA0A0C4DH43 119 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 PNMA8CA0A1B0GUJ8 204 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 A0A1W2PPH5 198 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR2AT4A6NND4 320 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 E9PI62 339 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 TRAPPC2LH3BP13 241 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 PHF1O43189 567 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 RHBDL1O75783 438 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 KNG1P01042 644 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 LHBP01229 141 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 MT-ND2P03891 347 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 LIPFP07098 398 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 PGA5P0DJD9 388 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 EGR1P18146 543 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 CELP19835 753 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 C21orf33P30042 268 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 SOX2P48431 317 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 GTF2A1P52655 376 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 BDH1Q02338 343 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 HNRNPA0Q13151 305 aaKnown RBP4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 IKZF1Q13422 519 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 SPHARQ15513 63 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 MED22Q15528 200 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 UBE2V2Q15819 145 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 C11orf91Q3C1V1 193 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 YIF1BQ5BJH7 314 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 DMRTC1Q5HYR2 192 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 RNLSQ5VYX0 342 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 WDR25Q64LD2 544 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 STUMQ69YW2 141 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 SLC25A26Q70HW3 274 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 C11orf53Q8IXP5 236 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 CMTM4Q8IZR5 234 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 TMEM185AQ8NFB2 350 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR51A4Q8NGJ6 313 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 NANPQ8TBE9 248 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 H1FXQ92522 213 aaKnown RBP4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 GHSRQ92847 366 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 UFD1Q92890 307 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 EMG1Q92979 244 aaKnown RBP4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 TMEM106AQ96A25 262 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 ADAT3Q96EY9 351 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 GPER1Q99527 375 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 S100A13Q99584 98 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 CCL13Q99616 98 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 NUDT16L1Q9BRJ7 211 aaKnown RBP4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 CDCA4Q9BXL8 241 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 SNTG1Q9NSN8 517 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 FKBP14Q9NWM8 211 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 KAAG1Q9UBP8 84 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 CLEC2DQ9UHP7 191 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 METRNQ9UJH8 293 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 AUP1Q9Y679 476 aa4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 FLNAP21333 2647 aaKnown RBP4.51□□□□□ -1.69
HMGB1P40-201ENST00000525121 RTTNQ86VV8 2226 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 A0A1W2PQ09 198 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 KIAA1324LA8MWY0 1029 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 DVL1O14640 695 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 OGG1O15527 345 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 SYNGR1O43759 233 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 NOS1APO75052 506 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 ALX3O95076 343 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 ACAA1P09110 424 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 HSMCR30P0CW71 290 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 TMEM225BP0DP42 221 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 NDUFB7P17568 137 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 CRHBPP24387 322 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 FPR2P25090 351 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 MPZP25189 248 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZFP36P26651 326 aaKnown RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 BMXP51813 675 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 GABARAPL2P60520 117 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 SEC61A1P61619 476 aaKnown RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 SLC35A2P78381 396 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 BLMHQ13867 455 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 TRAM1Q15629 374 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 Q499Y3 187 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 DDI2Q5TDH0 399 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 METTL11BQ5VVY1 283 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 DMKNQ6E0U4 476 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 LAIR2Q6ISS4 152 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 LYPD2Q6UXB3 125 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 RBMS3Q6XE24 437 aaKnown RBP4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 ACP7Q6ZNF0 438 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 IL17RELQ6ZVW7 336 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 PRSS48Q7RTY5 328 aa4.5□□□□□ -1.69
HMGB1P40-201ENST00000525121 C1QL2Q7Z5L3 287 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms