RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	PCSK4	Q6UW60	755 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006		Q6ZSR3	168 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	SLC36A1	Q7Z2H8	476 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	ZADH2	Q8N4Q0	377 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	ARRDC1	Q8N5I2	433 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	NAXE	Q8NCW5	288 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	OR8H1	Q8NGG4	311 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	SARAF	Q96BY9	339 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	GMPPA	Q96IJ6	420 aa	Predicted RBP	9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	RADIL	Q96JH8	1075 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	PHB2	Q99623	299 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	C1QTNF5	Q9BXJ0	243 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	PECR	Q9BY49	303 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	ALX4	Q9H161	411 aa	Predicted RBP	9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	EHF	Q9NZC4	300 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	SPRR3	Q9UBC9	169 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	C14orf166	Q9Y224	244 aa	Known RBP	9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	NPTN	Q9Y639	398 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	SPTA1	P02549	2419 aa		9.36	□□□□□ -0.91
SPIDR-222	ENST00000524006	COL12A1	Q99715	3063 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	ANKRD30BL	A7E2S9	258 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006		E9PLN8	166 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006		H3BUI4	141 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	RRP8	O43159	456 aa	Known RBP	9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	CA11	O75493	328 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	RGS11	O94810	467 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	IFNA7	P01567	189 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	NAT2	P11245	290 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	ACKR3	P25106	362 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	NTF4	P34130	210 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	ECI1	P42126	302 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	UBE2M	P61081	183 aa	Known RBP	9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	ZNF92	Q03936	586 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	HGFAC	Q04756	655 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	OR8B8	Q15620	311 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	TBC1D28	Q2M2D7	210 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	ATPAF1	Q5TC12	328 aa	Predicted RBP	9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	FBXW9	Q5XUX1	488 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	LYG2	Q86SG7	212 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	ZDHHC23	Q8IYP9	409 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	MUC20	Q8N307	709 aa	Predicted RBP	9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	ZNF843	Q8N446	348 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	GVQW1	Q8N7I0	195 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	FDCSP	Q8NFU4	85 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	OR1K1	Q8NGR3	316 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	SSC4D	Q8WTU2	575 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	WDYHV1	Q96HA8	205 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	TRIB1	Q96RU8	372 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	ST6GALNAC5	Q9BVH7	336 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	TM2D1	Q9BX74	207 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	ZNF552	Q9H707	407 aa	Predicted RBP	9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	ZDHHC11	Q9H8X9	412 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	CDH20	Q9HBT6	801 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	MYOZ1	Q9NP98	299 aa	Predicted RBP	9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	9.35	□□□□□ -0.91	5e-7	■■■■■ 41.3
SPIDR-222	ENST00000524006	ZNF224	Q9NZL3	707 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	ELF5	Q9UKW6	265 aa	Predicted RBP	9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	KCNK7	Q9Y2U2	307 aa		9.35	□□□□□ -0.91
SPIDR-222	ENST00000524006	FXYD6-FXYD2	A0A087WZ82	144 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006		A0A0A6YYD4	124 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006		A0A1W2PP11	408 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	ZNF850	A8MQ14	1090 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	AKR7A2	O43488	359 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	SPRY1	O43609	319 aa	Predicted RBP	9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	ANGPTL7	O43827	346 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	SSX5	O60225	188 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	RAD51D	O75771	328 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	TPO	P07202	933 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	EDN3	P14138	238 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	PLA2G2A	P14555	144 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	AKR1C4	P17516	323 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	SNU13	P55769	128 aa	Known RBP	9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	RAB14	P61106	215 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	RAB1A	P62820	205 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	FAM3A	P98173	230 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	FGL1	Q08830	312 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	RSPO1	Q2MKA7	263 aa	Predicted RBP	9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	DMRTC1	Q5HYR2	192 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	VAX1	Q5SQQ9	334 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	FAHD2B	Q6P2I3	314 aa	Predicted RBP	9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	NUFIP2	Q7Z417	695 aa	Known RBP	9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	OSR2	Q8N2R0	312 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	OR56B2P	Q8NGI1	322 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	LILRB4	Q8NHJ6	448 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	CASTOR1	Q8WTX7	329 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	MRPS24	Q96EL2	167 aa	Known RBP	9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	ELMOD3	Q96FG2	381 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	FAHD2A	Q96GK7	314 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006		Q96M66	194 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	C1orf147	Q96MC9	270 aa	Predicted RBP	9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	GPR137	Q96N19	417 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	OCSTAMP	Q9BR26	566 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	FXYD6	Q9H0Q3	95 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	PPA2	Q9H2U2	334 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	CHMP1A	Q9HD42	196 aa	Predicted RBP	9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	PRSS50	Q9UI38	385 aa		9.34	□□□□□ -0.91
SPIDR-222	ENST00000524006	FAM25E	A8MYX2	175 aa		9.33	□□□□□ -0.92
SPIDR-222	ENST00000524006	AQP7	O14520	342 aa		9.33	□□□□□ -0.92
SPIDR-222	ENST00000524006	ZNF735	P0CB33	412 aa		9.33	□□□□□ -0.92
SPIDR-222	ENST00000524006	ANOS1	P23352	680 aa		9.33	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms