RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 CLHC1Q8NHS4 586 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 PDCD6IPQ8WUM4 868 aaKnown RBP3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 GTF2H4Q92759 462 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 ZNF396Q96N95 335 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 CYTH2Q99418 400 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 NUDT9Q9BW91 350 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 OPN4Q9UHM6 478 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 PRO0628Q9UI54 55 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 ENPP5Q9UJA9 477 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 TSPOAP1O95153 1857 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 MYO10Q9HD67 2058 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 IGHV3-49A0A0A0MS15 119 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 CENPBD1B2RD01 187 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 MKRN2OSH3BPM6 223 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 SGCEO43556 437 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 MAGEA3P43357 314 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 RAB38P57729 211 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 C5orf47Q569G3 176 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 FAM71E1Q6IPT2 247 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 ZFP1Q6P2D0 407 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 SLC25A29Q8N8R3 303 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR4M2Q8NGB6 313 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR4K2Q8NGD2 314 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 ZNF461Q8TAF7 563 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 ESR2Q92731 530 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR10C1Q96KK4 312 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 ZNF285Q96NJ3 590 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 RNF5Q99942 180 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 TBL1YQ9BQ87 522 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 NXF2Q9GZY0 626 aaKnown RBP3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 TMBIM4Q9HC24 238 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 MS4A12Q9NXJ0 267 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 USH1CQ9Y6N9 552 aa3.31□□□□□ -1.88
HMGB1P47-201ENST00000511281 CLDN34H7C241 214 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 SHOX2O60902 331 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 FOXH1O75593 365 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 CCNKO75909 580 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 YEATS4O95619 227 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 GP1BAP07359 652 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 ADRA2AP08913 450 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR4Q2P0C623 313 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 GIMD1P0DJR0 217 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 IL1RNP18510 177 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 MAP3K7CLP57077 242 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 PFN3P60673 137 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 SYCP1Q15431 976 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 BSXQ3C1V8 233 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 CLEC12AQ5QGZ9 265 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 FAM222AQ5U5X8 452 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 CLEC19AQ6UXS0 136 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 AHSA2Q719I0 299 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 IQCF2Q8IXL9 164 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 SELENOHQ8IZQ5 122 aaKnown RBP3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 LINC00337Q8N6G1 96 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 SPANXA2-OT1Q8N9U9 137 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 NECAP1Q8NC96 275 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR5T1Q8NG75 326 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR4K17Q8NGC6 315 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR5P2Q8WZ92 322 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 TMEM159Q96B96 161 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 HBEGFQ99075 208 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 ENOPH1Q9UHY7 261 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 TMEM131Q92545 1883 aa3.3□□□□□ -1.88
HMGB1P47-201ENST00000511281 IGKV6D-41A0A0C4DH26 115 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 TMEM72A0PK05 275 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 TMEM213A2RRL7 107 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 NELFEP18615 380 aaKnown RBP3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 HTR2BP41595 481 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 PPP1CAP62136 330 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 CD164Q04900 197 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 CDC20Q12834 499 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 TPBGQ13641 420 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 HBMQ6B0K9 141 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 NT5DC3Q86UY8 548 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 SPATA24Q86W54 205 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 ZNF738Q8NE65 137 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR5M1Q8NGP8 315 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR13G1Q8NGZ3 307 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 PHF10Q8WUB8 498 aaKnown RBP3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 FRZBQ92765 325 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 CATSPER2Q96P56 530 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR2M4Q96R27 311 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 METTL26Q96S19 204 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 ANGPTL4Q9BY76 406 aa3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 FARSAQ9Y285 508 aaKnown RBP3.29□□□□□ -1.88
HMGB1P47-201ENST00000511281 DYSFO75923 2080 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 KIR2DS1A0A191URI9 304 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 A0A1B0GX12 115 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR2AT4A6NND4 320 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 CRXO43186 299 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 ZNF324O75467 553 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 MRPL3P09001 348 aaKnown RBP3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 MUC1P15941 1255 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 TEAD1P28347 426 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 MAGEA6P43360 314 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 UBE2KP61086 200 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 GRB2P62993 217 aaKnown RBP3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 BAXQ07812 192 aa3.28□□□□□ -1.88
HMGB1P47-201ENST00000511281 ADIGQ0VDE8 80 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms