RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 RBPJQ06330 500 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 FGL1Q08830 312 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 DBPQ10586 325 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-208ENST00000489537 ARFRP1Q13795 201 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 MPPED2Q15777 294 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 GRK1Q15835 563 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 KCNJ8Q15842 424 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 CEACAM21Q3KPI0 293 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF260Q3ZCT1 412 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 PLEKHN1Q494U1 663 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-208ENST00000489537 VAX1Q5SQQ9 334 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 FIP1L1Q6UN15 594 aaKnown RBP5.52□□□□□ -1.53
SF3A3-208ENST00000489537 GLDNQ6ZMI3 551 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF573Q86YE8 665 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 WDFY1Q8IWB7 410 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 ZBTB8BQ8NAP8 495 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-208ENST00000489537 OR4D6Q8NGJ1 314 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 OR51T1Q8NGJ9 327 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 GRPEL2Q8TAA5 225 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 BCL2L2Q92843 193 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-208ENST00000489537 PPP1R14AQ96A00 147 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 UPRTQ96BW1 309 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 ORAI1Q96D31 301 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 VRK1Q99986 396 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-208ENST00000489537 DHRS9Q9BPW9 319 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 HES7Q9BYE0 225 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 GHITMQ9H3K2 345 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 PIGMQ9H3S5 423 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 PLSCR4Q9NRQ2 329 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 B3GNT2Q9NY97 397 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 ZNF224Q9NZL3 707 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 KLK11Q9UBX7 282 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 CGGBP1Q9UFW8 167 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-208ENST00000489537 TUBD1Q9UJT1 453 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 PROCRQ9UNN8 238 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 POLDIP2Q9Y2S7 368 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 AMDHD2Q9Y303 409 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 ALG5Q9Y673 324 aa5.52□□□□□ -1.53
SF3A3-208ENST00000489537 TLN1Q9Y490 2541 aaKnown RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 C5orf49A4QMS7 147 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 MBD3L4A6NDZ8 208 aaPredicted RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 MBD3L3A6NE82 208 aaPredicted RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 A6NIN4 97 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 MBD3L5A6NJ08 208 aaPredicted RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 LANCL1O43813 399 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 MT-ND4P03905 459 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 AMY2AP04746 511 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 RAC2P15153 192 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 CBR1P16152 277 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 FAHP16930 419 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 NAT1P18440 290 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 KLK2P20151 261 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 BTCP35070 178 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 OPRM1P35372 400 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 TIMP3P35625 211 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 RAD52P43351 418 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 OR3A3P47888 321 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 SRP9P49458 86 aaKnown RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 VEGFCP49767 419 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 RPS23P62266 143 aaKnown RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 FAM3AP98173 230 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 CYCSP99999 105 aaKnown RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 GUSBP1Q15486 140 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 UBE2V2Q15819 145 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 SRSF7Q16629 238 aaKnown RBP eCLIP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 RSPO1Q2MKA7 263 aaPredicted RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 MPV17LQ2QL34 196 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 SLC22A6Q4U2R8 563 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 NHLRC3Q5JS37 347 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 PLCXD3Q63HM9 321 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 ELP2Q6IA86 826 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 ASPHD2Q6ICH7 369 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 CDPF1Q6NVV7 123 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 TFAP2EQ6VUC0 442 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 FBXW12Q6X9E4 464 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 TRAPPC6BQ86SZ2 158 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 NOXA1Q86UR1 476 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 ZDHHC23Q8IYP9 409 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 SLC30A7Q8NEW0 376 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 AKR7LQ8NHP1 331 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 MBD3L2Q8NHZ7 208 aaPredicted RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 GTF3AQ92664 365 aaKnown RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 POM121L2Q96KW2 1035 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 GPR137Q96N19 417 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 TRIB1Q96RU8 372 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 SLX1AQ9BQ83 275 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 GINS4Q9BRT9 223 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 SFXN3Q9BWM7 321 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 GON7Q9BXV9 100 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 BCL2L14Q9BZR8 327 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 PKIBQ9C010 78 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 SELENOIQ9C0D9 397 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 ELL3Q9HB65 397 aaPredicted RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 PLEKHJ1Q9NW61 149 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 MRPL15Q9P015 296 aaKnown RBP5.51□□□□□ -1.53
SF3A3-208ENST00000489537 SPRR3Q9UBC9 169 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 SLC23A1Q9UHI7 598 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 PCNX3Q9H6A9 2034 aa5.51□□□□□ -1.53
SF3A3-208ENST00000489537 NBPF19A0A087WUL8 3843 aa5.5□□□□□ -1.53
SF3A3-208ENST00000489537 TRAV6A0A075B6T7 132 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms