RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PLEKHG2Q9H7P9 1386 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 A0A0J9YYE9 177 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 KBTBD11-OT1A0A1B0GTJ5 212 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 KNCNA6PVL3 124 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 LINC01619G3V211 115 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 EIF3HO15372 352 aaKnown RBP eCLIP0.36□□□□□ -2.35
CCDC93-209ENST00000488908 PSIP1O75475 530 aaKnown RBP0.36□□□□□ -2.35
CCDC93-209ENST00000488908 RAB36O95755 333 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 CD160O95971 181 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 TRBC1P01850 177 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 HLA-HP01893 362 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 KRT14P02533 472 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 TRGV3P03979 118 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 OPN1SWP03999 348 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 GABRG2P18507 467 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 GNRHRP30968 328 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 HTR2BP41595 481 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 SLC18A1P54219 525 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 RGS8P57771 180 aaPredicted RBP0.36□□□□□ -2.35
CCDC93-209ENST00000488908 ELOCQ15369 112 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 SS18Q15532 418 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 TNXAQ16473 311 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 LINC00303Q3SY05 128 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 SPIN4Q56A73 249 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 ACSBG2Q5FVE4 666 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 CLEC18BQ6UXF7 455 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 FAM231DQ6ZW35 169 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 SCD5Q86SK9 330 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 NAA40Q86UY6 237 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 C2orf73Q8N5S3 287 aaPredicted RBP0.36□□□□□ -2.35
CCDC93-209ENST00000488908 OR10D4PQ8NGN7 298 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 OR8S1Q8NH09 359 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 DYNLL2Q96FJ2 89 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 PYURFQ96I23 114 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 TSGA10Q9BZW7 698 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 SLC7A5P2Q9GIP4 190 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 MCUBQ9NWR8 336 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 FAM206AQ9NX38 181 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 TAC3Q9UHF0 121 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 COL4A1P02462 1669 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 MPDZO75970 2070 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 UBN2Q6ZU65 1347 aa0.36□□□□□ -2.35
CCDC93-209ENST00000488908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.35□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF608Q9ULD9 1512 aaPredicted RBP0.35□□□□□ -2.35
CCDC93-209ENST00000488908 IGHV3-43A0A0B4J1X8 118 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 TRAV8-6A0A0B4J262 113 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 ERICH4A6NGS2 130 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 SIGLEC16A6NMB1 481 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 F5H5P2 479 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 K7EPK0 472 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 TP53I11O14683 189 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 FFAR1O14842 300 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 XRCC2O43543 280 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 CIB2O75838 187 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 OR2F2O95006 317 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 TTC4O95801 387 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 HLA-AP01891 365 aaKnown RBP0.35□□□□□ -2.35
CCDC93-209ENST00000488908 CGB3P0DN86 165 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 STOMP27105 288 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 SLC1A2P43004 574 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 UQCRFS1P47985 274 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 SERPINB8P50452 374 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 MTPNP58546 118 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 PSG4Q00888 419 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 LAMTOR4Q0VGL1 99 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 BCL2A1Q16548 175 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 PYCR3Q53H96 274 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 TTMPQ5BVD1 217 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 THOC7Q6I9Y2 204 aaKnown RBP0.35□□□□□ -2.35
CCDC93-209ENST00000488908 NDUFAF7Q7L592 441 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 TAS2R42Q7RTR8 314 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 TBC1D21Q8IYX1 336 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 HS3ST5Q8IZT8 346 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 SLC7A5P1Q8MH63 180 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF555Q8NEP9 628 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 OR10Z1Q8NGY1 313 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 OR51F2Q8NH61 342 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 OR2V1Q8NHB1 315 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 AKR7LQ8NHP1 331 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 CACNG8Q8WXS5 425 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 DNAJC30Q96LL9 226 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 SCGB3A2Q96PL1 93 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 PLIN2Q99541 437 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 MRPL20Q9BYC9 149 aaKnown RBP0.35□□□□□ -2.35
CCDC93-209ENST00000488908 GABARAPL1Q9H0R8 117 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 CXCL16Q9H2A7 254 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 REEP1Q9H902 201 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF160Q9HCG1 818 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 SLC7A11Q9UPY5 501 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 CCL26Q9Y258 94 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 PPIL1Q9Y3C6 166 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 MED13Q9UHV7 2174 aa0.35□□□□□ -2.35
CCDC93-209ENST00000488908 ATG2BQ96BY7 2078 aa0.34□□□□□ -2.35
CCDC93-209ENST00000488908 KCNE1BA0A087WTH5 132 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 TRAV8-4A0A0B4J246 113 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 H3BMM0 161 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 H3BRN7 92 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 CPLX1O14810 134 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 SLC37A4O43826 429 aa0.34□□□□□ -2.36
CCDC93-209ENST00000488908 CACNG3O60359 315 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms