RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 NEIL3Q8TAT5 605 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 RNF133Q8WVZ7 376 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 NELFBQ8WX92 580 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 RERGQ96A58 199 aaPredicted RBP3.11□□□□□ -1.91
VPS13D-207ENST00000476169 S100PBPQ96BU1 408 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 GALNT14Q96FL9 552 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 MRAP2Q96G30 205 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 TAS2R13Q9NYV9 303 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 DEC1Q9P2X7 70 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF257Q9Y2Q1 563 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 SIGLEC9Q9Y336 463 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 TBL2Q9Y4P3 447 aaKnown RBP3.11□□□□□ -1.91
VPS13D-207ENST00000476169 HES2Q9Y543 173 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 F11RQ9Y624 299 aaKnown RBP3.11□□□□□ -1.91
VPS13D-207ENST00000476169 PRSS21Q9Y6M0 314 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 MAP3K15Q6ZN16 1313 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 COL16A1Q07092 1604 aaPredicted RBP3.11□□□□□ -1.91
VPS13D-207ENST00000476169 AHDC1Q5TGY3 1603 aaPredicted RBP3.11□□□□□ -1.91
VPS13D-207ENST00000476169 KIAA0232Q92628 1395 aa3.11□□□□□ -1.91
VPS13D-207ENST00000476169 ATRNO75882 1429 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 PPIP5K1Q6PFW1 1433 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 RALGAPBQ86X10 1494 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 CDC42BPGQ6DT37 1551 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 IGHV3OR16-9A0A0B4J2B5 98 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 A0A1W2PPR1 153 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 J3QT63 122 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 PEX7O00628 323 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 MYL12BO14950 172 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 PI15O43692 258 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 RP2O75695 350 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 RLN2P04090 185 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 MMP7P09237 267 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-207ENST00000476169 NQO1P15559 274 aaKnown RBP3.1□□□□□ -1.91
VPS13D-207ENST00000476169 UGT2B7P16662 529 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF7P17097 686 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-207ENST00000476169 CAPN2P17655 700 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 GABRR1P24046 479 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 CYB561P49447 251 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF138P52744 262 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 STC1P52823 247 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 PRR3P79522 188 aaKnown RBP3.1□□□□□ -1.91
VPS13D-207ENST00000476169 MRPS25P82663 173 aaKnown RBP3.1□□□□□ -1.91
VPS13D-207ENST00000476169 KDSRQ06136 332 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 CKAP4Q07065 602 aaKnown RBP3.1□□□□□ -1.91
VPS13D-207ENST00000476169 LAMTOR4Q0VGL1 99 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 RBMY1FQ15415 496 aaKnown RBP3.1□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF630Q2M218 657 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-207ENST00000476169 CEACAM21Q3KPI0 293 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 CDNFQ49AH0 187 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 FAM45BPQ6NSW5 357 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 DNAJC24Q6P3W2 148 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 UGT2A3Q6UWM9 527 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 KRTAP7-1Q8IUC3 87 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 BLIDQ8IZY5 108 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 SPICQ8N5J4 248 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 TMEM156Q8N614 296 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 OR5L1Q8NGL2 311 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 OR1S1Q8NH92 325 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 ACTL9Q8TC94 416 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 C7orf33Q8WU49 177 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 OR2M4Q96R27 311 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 TEAD3Q99594 435 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 GPR22Q99680 433 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 APOL4Q9BPW4 351 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 PAXXQ9BUH6 204 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 MRPS26Q9BYN8 205 aaKnown RBP3.1□□□□□ -1.91
VPS13D-207ENST00000476169 SLC19A3Q9BZV2 496 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 OR51V1Q9H2C8 321 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 SPNS1Q9H2V7 528 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 ZNF702PQ9H963 129 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 TMEM27Q9HBJ8 222 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 KLK13Q9UKR3 277 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 RAB22AQ9UL26 194 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 THSD7BQ9C0I4 1608 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 EVC2Q86UK5 1308 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 CAMTA1Q9Y6Y1 1673 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 LRRK1Q38SD2 2015 aa3.1□□□□□ -1.91
VPS13D-207ENST00000476169 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-207ENST00000476169 CD163L1Q9NR16 1453 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 SLIT2O94813 1529 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 PCNX3Q9H6A9 2034 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 KDM5AP29375 1690 aaKnown RBP3.09□□□□□ -1.91
VPS13D-207ENST00000476169 IGHV1-69DA0A0B4J2H0 117 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 OR6C70A6NIJ9 312 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 LRRN3E7EW58 273 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 LINC01619G3V211 115 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 PFDN6O15212 129 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 SLC31A1O15431 190 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 SSNA1O43805 119 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 RAD1O60671 282 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 ENTPD6O75354 484 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 MMP23AO75900 390 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 SUPT7LO94864 414 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 GABARAPO95166 117 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 LYPLA2O95372 231 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 SLC25A27O95847 323 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 BGLAPP02818 100 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 BCHEP06276 602 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 SERPINA6P08185 405 aa3.09□□□□□ -1.91
VPS13D-207ENST00000476169 MLNP12872 115 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms