RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 C22orf46C9J442 243 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 DVL1O14640 695 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 TMPRSS2O15393 492 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 NOS1APO75052 506 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-206ENST00000462306 GATBO75879 557 aaKnown RBP13.16□□□□□ -0.3
ERCC3-206ENST00000462306 SERPINA3P01011 423 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 FSHBP01225 129 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 CCDC159P0C7I6 412 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 PGA5P0DJD9 388 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 ADRA2CP18825 462 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 MYL12AP19105 171 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 GLRA1P23415 457 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 FUT6P51993 359 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 RIPK1Q13546 671 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 CCDC58Q4VC31 144 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 TMPRSS11AQ6ZMR5 421 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 UTS2BQ765I0 119 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 C1QL2Q7Z5L3 287 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 ANGPTL5Q86XS5 388 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 FAM216BQ8N7L0 139 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 POC1AQ8NBT0 407 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 ZNF485Q8NCK3 441 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 BPIFB6Q8NFQ5 453 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 OR5AK2Q8NH90 309 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 ANGPTL6Q8NI99 470 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 RPS4Y2Q8TD47 263 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 ZNF488Q96MN9 340 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 DNTTIP1Q9H147 329 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 FKBP14Q9NWM8 211 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 NLKQ9UBE8 527 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 DNAJB11Q9UBS4 358 aa13.16□□□□□ -0.3
ERCC3-206ENST00000462306 TRBV2A0A0J9YWF9 115 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 LALBAP00709 142 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 TFF1P04155 84 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 ACAA1P09110 424 aaPredicted RBP13.15□□□□□ -0.3
ERCC3-206ENST00000462306 ZNF20P17024 532 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 CDK5R1Q15078 307 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 RPL22L1Q6P5R6 122 aaKnown RBP13.15□□□□□ -0.3
ERCC3-206ENST00000462306 ZNF788Q6ZQV5 615 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 FGFRL1Q8N441 504 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 TEX29Q8N6K0 151 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 DNAAF1Q8NEP3 725 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 OR13C3Q8NGS6 347 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 OR52N1Q8NH53 320 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 RGP1Q92546 391 aaPredicted RBP13.15□□□□□ -0.3
ERCC3-206ENST00000462306 TMIGD2Q96BF3 282 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 NRIP2Q9BQI9 281 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 NUDT16L1Q9BRJ7 211 aaKnown RBP13.15□□□□□ -0.3
ERCC3-206ENST00000462306 PKIBQ9C010 78 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 COMMD4Q9H0A8 199 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 VCX3BQ9H321 246 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 BABAM2Q9NXR7 383 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 RASL12Q9NYN1 266 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 ZNF222Q9UK12 451 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 AUP1Q9Y679 476 aa13.15□□□□□ -0.3
ERCC3-206ENST00000462306 SIRT4Q9Y6E7 314 aaPredicted RBP13.15□□□□□ -0.3
ERCC3-206ENST00000462306 ATRQ13535 2644 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 IGKV1D-17A0A075B6S4 117 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 OR2AT4A6NND4 320 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 OGG1O15527 345 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 ATP6V1G2O95670 118 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 RPSAP08865 295 aaKnown RBP13.14□□□□□ -0.31
ERCC3-206ENST00000462306 PSG2P11465 335 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 SELLP14151 372 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 ATF1P18846 271 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 C21orf33P30042 268 aaPredicted RBP13.14□□□□□ -0.31
ERCC3-206ENST00000462306 ERVK11-1P61568 191 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 IL24Q13007 206 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 CNN3Q15417 329 aaKnown RBP13.14□□□□□ -0.31
ERCC3-206ENST00000462306 C11orf91Q3C1V1 193 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 C6orf141Q5SZD1 244 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 CD276Q5ZPR3 534 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 BTNL3Q6UXE8 466 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 ACP7Q6ZNF0 438 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 AHSA2Q719I0 299 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 SLC36A1Q7Z2H8 476 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 NANPQ8TBE9 248 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 GATAD2BQ8WXI9 593 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 BORCS8Q96FH0 119 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 GAFA1Q96PS6 74 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 HES4Q9HCC6 221 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 CHCHD3Q9NX63 227 aaKnown RBP13.14□□□□□ -0.31
ERCC3-206ENST00000462306 METRNQ9UJH8 293 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 POLDIP2Q9Y2S7 368 aa13.14□□□□□ -0.31
ERCC3-206ENST00000462306 ENSAO43768 121 aaKnown RBP13.13□□□□□ -0.31
ERCC3-206ENST00000462306 MYF6P23409 242 aa13.13□□□□□ -0.31
ERCC3-206ENST00000462306 AZGP1P25311 298 aaKnown RBP13.13□□□□□ -0.31
ERCC3-206ENST00000462306 MED21Q13503 144 aa13.13□□□□□ -0.31
ERCC3-206ENST00000462306 KLF17Q5JT82 389 aaPredicted RBP13.13□□□□□ -0.31
ERCC3-206ENST00000462306 IZUMO2Q6UXV1 221 aa13.13□□□□□ -0.31
ERCC3-206ENST00000462306 BTN2A1Q7KYR7 527 aa13.13□□□□□ -0.31
ERCC3-206ENST00000462306 PARP16Q8N5Y8 322 aa13.13□□□□□ -0.31
ERCC3-206ENST00000462306 MRI1Q9BV20 369 aa13.13□□□□□ -0.31
ERCC3-206ENST00000462306 ANKRD60Q9BZ19 345 aa13.13□□□□□ -0.31
ERCC3-206ENST00000462306 MTCH1Q9NZJ7 389 aa13.13□□□□□ -0.31
ERCC3-206ENST00000462306 NKX6-3A6NJ46 265 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 SLC1A7O00341 560 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 SIGLEC5O15389 551 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 NDUFB3O43676 98 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 ECDO95905 644 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms