RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SMDT1Q9H4I9 107 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 FNDC4Q9H6D8 234 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 RHOFQ9HBH0 211 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 BEX1Q9HBH7 125 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 MYOZ2Q9NPC6 264 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 ASCL3Q9NQ33 180 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 ACER3Q9NUN7 267 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 MARCH5Q9NX47 278 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 NLGN3Q9NZ94 848 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 PIPOXQ9P0Z9 390 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 P2RX2Q9UBL9 471 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 ZNF107Q9UII5 783 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 EXOGQ9Y2C4 368 aaKnown RBP3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 YARS2Q9Y2Z4 477 aaKnown RBP3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 MEMO1Q9Y316 297 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 NOP16Q9Y3C1 178 aaKnown RBP3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 KIAA1549LQ6ZVL6 1849 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 HELZP42694 1942 aaKnown RBP3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 RLFQ13129 1914 aa3.71□□□□□ -1.82
HMGB1P16-201ENST00000447155 IGKV6-21A0A0C4DH24 114 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 DAPL1A0PJW8 107 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 COLCA2A8K830 154 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 PPP5D1E7EU14 171 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 LMO7DNF2Z398 122 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 NDUFS8O00217 210 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 ITGB1BP1O14713 200 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 PPIHO43447 177 aaKnown RBP3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 SOCS5O75159 536 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 RPP14O95059 124 aaKnown RBP3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 AKR7A3O95154 331 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 NSA2O95478 260 aaKnown RBP3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 AIFM1O95831 613 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 ACTL6AO96019 429 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 PDYNP01213 254 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 IGF2P01344 180 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 OPN1LWP04000 364 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 MELTFP08582 738 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 HCKP08631 526 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 UCHL1P09936 223 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 OR8G3PP0DMU2 310 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 ZNF44P15621 663 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 GABRR1P24046 479 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 EDNRAP25101 427 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 GPR183P32249 361 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 OR1E2P47887 323 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 CCR4P51679 360 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 YBEYP58557 167 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 RANP62826 216 aaKnown RBP3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 SLC7A9P82251 487 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 H3F3AP84243 136 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 TNFRSF9Q07011 255 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 ELAVL2Q12926 359 aaKnown RBP3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 SRSF5Q13243 272 aaKnown RBP3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 NFATC2Q13469 925 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 MEF2DQ14814 521 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 SLC10A1Q14973 349 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 IQCJQ1A5X6 159 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 SLC5A12Q1EHB4 618 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 PGGHGQ32M88 737 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 C14orf28Q4W4Y0 310 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 ACTBL2Q562R1 376 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 TMEM255AQ5JRV8 349 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 EOGTQ5NDL2 527 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 CTSL3PQ5NE16 218 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 GFI1BQ5VTD9 330 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 ETFRF1Q6IPR1 90 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 MED27Q6P2C8 311 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 ARL9Q6T311 187 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 PAQR6Q6TCH4 344 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 TMEM64Q6YI46 380 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 CLEC20AQ6ZU45 233 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 SLC35D2Q76EJ3 337 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 BHLHA9Q7RTU4 235 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 FAM220AQ7Z4H9 259 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 C6orf120Q7Z4R8 191 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 CEACAM19Q7Z692 300 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 RANBP3LQ86VV4 465 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 VRK2Q86Y07 508 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 TRAPPC5Q8IUR0 188 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 FBXO16Q8IX29 292 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 BAP18Q8IXM2 172 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 UMODL1-AS1Q8N2C9 162 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 ARRDC1Q8N5I2 433 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 ZFP41Q8N8Y5 198 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 PLPP5Q8NEB5 264 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 NUP37Q8NFH4 326 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 OR2T33Q8NG76 320 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 OR4K5Q8NGD3 323 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 OR5D16Q8NGK9 328 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 OR13C4Q8NGS5 318 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 OR5W2Q8NH69 310 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 OR4C6Q8NH72 309 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 ZNF519Q8TB69 540 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 SPRYD4Q8WW59 207 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 SMPDL3AQ92484 453 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 HAS2Q92819 552 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 OTUB2Q96DC9 234 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 OR5B2Q96R09 309 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 MICU1Q9BPX6 476 aa3.7□□□□□ -1.82
HMGB1P16-201ENST00000447155 EBPLQ9BY08 206 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms