RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CSTAP01040 98 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 PCCBP05166 539 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 CTSDP07339 412 aaPredicted RBP4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR4A8P0C604 315 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 STAG3L3P0CL85 134 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 SMIM17P0DL12 118 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMIGD3P0DMS9 266 aaPredicted RBP4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 IRF1P10914 325 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 PNMTP11086 282 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 NPPBP16860 134 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 AMY2BP19961 511 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 TCN2P20062 427 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 FUT3P21217 361 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 BSGP35613 385 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 PSMB10P40306 273 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 GATA4P43694 442 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 RGRP47804 291 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 SPINT3P49223 89 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 CCR5P51681 352 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 NHLH1Q02575 133 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF92Q03936 586 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 GPR18Q14330 331 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 ICAM4Q14773 271 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 VAMP3Q15836 100 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF260Q3ZCT1 412 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 GLYATL3Q5SZD4 288 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 FAM162BQ5T6X4 162 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 XP32Q5T750 250 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR4C11Q6IEV9 310 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC8B1Q6J4K2 584 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC18B1Q6NT16 456 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF343Q6P1L6 599 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 WDR74Q6RFH5 385 aaPredicted RBP4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM184AQ6ZMB5 413 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 DPY19L4Q7Z388 723 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 NIT1Q86X76 327 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 CDC20BQ86Y33 519 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 CMTM1Q8IZ96 169 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 LGI3Q8N145 548 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC39A11Q8N1S5 342 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 D2HGDHQ8N465 521 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 LRTM2Q8N967 370 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR5A2Q8NGI9 324 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 CLDND2Q8NHS1 167 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 KCNG3Q8TAE7 436 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM234Q8WY98 164 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 DNASE2BQ8WZ79 361 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 FGF13Q92913 245 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 REEP6Q96HR9 211 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 CCDC74BQ96LY2 380 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 JSRP1Q96MG2 331 aaPredicted RBP4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF48Q96MX3 618 aaPredicted RBP4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 FOXN4Q96NZ1 517 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 MRPL13Q9BYD1 178 aaKnown RBP4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 SAMD10Q9BYL1 202 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 CST9LQ9H4G1 147 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 SDF2L1Q9HCN8 221 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 MANBALQ9NQG1 85 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 TM7SF3Q9NS93 570 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM30AQ9NV96 361 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR6C3Q9NZP0 311 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 IL36AQ9UHA7 158 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 FUT9Q9Y231 359 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 LSM5Q9Y4Y9 91 aaKnown RBP4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 SPACA6W5XKT8 324 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZC3H12DA2A288 527 aaKnown RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 SYNDIG1LA6NDD5 238 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR5B21A6NL26 309 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 A6NNC1 897 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 C17orf112F2Z3M2 114 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 PRAMEF26H0Y7S4 382 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 H0YL77 283 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 SAP18O00422 153 aaKnown RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 AQP7O14520 342 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 SMAD9O15198 467 aaKnown RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 UPK3AO75631 287 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 KBTBD11O94819 623 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 C1orf105O95561 183 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 EPPINO95925 133 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 NRASP01111 189 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 KRASP01116 189 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 MT-ND6P03923 174 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 ISG15P05161 165 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 REG1AP05451 166 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 HPNP05981 417 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 ACRP10323 421 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 HIST1H1CP16403 213 aaKnown RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 TUBG1P23258 451 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 GABRA3P34903 492 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF133P52736 654 aaPredicted RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 PPP1CBP62140 327 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 RPS15P62841 145 aaKnown RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 RHOGP84095 191 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 SERF2P84101 59 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 TSTA3Q13630 321 aaPredicted RBP4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 SLC9A3R2Q15599 337 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 CEBPEQ15744 281 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 EXT1Q16394 746 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 PRSS8Q16651 343 aa4.96□□□□□ -1.62
VTI1BP4-201ENST00000427516 HIST3H3Q16695 136 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms