RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 OR1J1Q8NGS3 322 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 SLC25A40Q8TBP6 338 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 MARS2Q96GW9 593 aaKnown RBP13.03□□□□□ -0.32
ACTB-204ENST00000425660 BCL2L14Q9BZR8 327 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 PCDHB16Q9NRJ7 776 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 IGHV2OR16-5A0A0B4J2B6 119 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 MEIS3P1A6NDR6 274 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 IQCF6A8MYZ5 107 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 CD74P04233 296 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 CD3DP04234 171 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 AKAIN1P0CW23 69 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 TRAPPC2P0DI81 140 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 TRAPPC2BP0DI82 140 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 SELEP16581 610 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 RCVRNP35243 200 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 GPM6AP51674 278 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 ERVS71-1P61550 626 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 STEAP1BQ6NZ63 245 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 RTN4RL2Q86UN3 420 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 KDF1Q8NAX2 398 aaPredicted RBP13.02□□□□□ -0.32
ACTB-204ENST00000425660 OR4C16Q8NGL9 310 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 OR51F2Q8NH61 342 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 KLF14Q8TD94 323 aaPredicted RBP13.02□□□□□ -0.32
ACTB-204ENST00000425660 ST8SIA4Q92187 359 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 ARHGAP5-AS1Q96IT6 56 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 USB1Q9BQ65 265 aaKnown RBP13.02□□□□□ -0.32
ACTB-204ENST00000425660 ACTR6Q9GZN1 396 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 ANAPC10Q9UM13 185 aa13.02□□□□□ -0.32
ACTB-204ENST00000425660 SERPINE3A8MV23 424 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 SSX5O60225 188 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 CA11O75493 328 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 CYB5AP00167 134 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 PLATP00750 562 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 SFTPBP07988 381 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 HLA-DMAP28067 261 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 PSG7Q13046 419 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 FAM76BQ5HYJ3 339 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 SFRP4Q6FHJ7 346 aaPredicted RBP13.02□□□□□ -0.33
ACTB-204ENST00000425660 FAAP20Q6NZ36 180 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 TRAPPC6BQ86SZ2 158 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 OR4D10Q8NGI6 311 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 OR56B4Q8NH76 319 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 NUDCD2Q8WVJ2 157 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 CCDC120Q96HB5 630 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 CNTNAP3BQ96NU0 1288 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 HIST1H2AAQ96QV6 131 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 DMRTA2Q96SC8 542 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 VKORC1Q9BQB6 163 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 CNTNAP3Q9BZ76 1288 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 ELOVL5Q9NYP7 299 aa13.02□□□□□ -0.33
ACTB-204ENST00000425660 ZNF732B4DXR9 585 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 EEF1E1-BLOC1S5C9J1V9 151 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 HTR3BO95264 441 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 HNRNPCP07910 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
ACTB-204ENST00000425660 BLVRBP30043 206 aaPredicted RBP13.01□□□□□ -0.33
ACTB-204ENST00000425660 HAAOP46952 286 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 GNG3P63215 75 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 NAAAQ02083 359 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 FAM27E3Q08E93 113 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 CARTPTQ16568 116 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 ELP2Q6IA86 826 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 SLC25A26Q70HW3 274 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 OSR2Q8N2R0 312 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 MUCL1Q96DR8 90 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 MCUBQ9NWR8 336 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 HSF4Q9ULV5 492 aa13.01□□□□□ -0.33
ACTB-204ENST00000425660 NOP16Q9Y3C1 178 aaKnown RBP13.01□□□□□ -0.33
ACTB-204ENST00000425660 PKD1L2Q7Z442 2459 aa13□□□□□ -0.33
ACTB-204ENST00000425660 SPTA1P02549 2419 aa13□□□□□ -0.33
ACTB-204ENST00000425660 ZGRF1Q86YA3 2104 aa13□□□□□ -0.33
ACTB-204ENST00000425660 C7orf66A4D0T2 115 aa13□□□□□ -0.33
ACTB-204ENST00000425660 TMEM8BA6NDV4 472 aa13□□□□□ -0.33
ACTB-204ENST00000425660 NDUFB6O95139 128 aa13□□□□□ -0.33
ACTB-204ENST00000425660 SFTPCP11686 197 aa13□□□□□ -0.33
ACTB-204ENST00000425660 NAT1P18440 290 aa13□□□□□ -0.33
ACTB-204ENST00000425660 CA6P23280 308 aa13□□□□□ -0.33
ACTB-204ENST00000425660 CALCRP30988 508 aa13□□□□□ -0.33
ACTB-204ENST00000425660 CCKARP32238 428 aa13□□□□□ -0.33
ACTB-204ENST00000425660 GNG2P59768 71 aa13□□□□□ -0.33
ACTB-204ENST00000425660 PPA1Q15181 289 aa13□□□□□ -0.33
ACTB-204ENST00000425660 SIGIRRQ6IA17 410 aa13□□□□□ -0.33
ACTB-204ENST00000425660 SEZ6L2Q6UXD5 910 aa13□□□□□ -0.33
ACTB-204ENST00000425660 ZNF573Q86YE8 665 aa13□□□□□ -0.33
ACTB-204ENST00000425660 LIX1LQ8IVB5 337 aa13□□□□□ -0.33
ACTB-204ENST00000425660 RELL2Q8NC24 303 aaPredicted RBP13□□□□□ -0.33
ACTB-204ENST00000425660 OCSTAMPQ9BR26 566 aa13□□□□□ -0.33
ACTB-204ENST00000425660 PECRQ9BY49 303 aa13□□□□□ -0.33
ACTB-204ENST00000425660 C20orf85Q9H1P6 137 aa13□□□□□ -0.33
ACTB-204ENST00000425660 ALG5Q9Y673 324 aa13□□□□□ -0.33
ACTB-204ENST00000425660 ITPR1Q14643 2758 aa13□□□□□ -0.33
ACTB-204ENST00000425660 TRAV6A0A075B6T7 132 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 ZNF736B4DX44 427 aaPredicted RBP12.99□□□□□ -0.33
ACTB-204ENST00000425660 DHFRP00374 187 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 TBPP20226 339 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 KITLGP21583 273 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 MPZP25189 248 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 MECP2P51608 486 aaKnown RBP12.99□□□□□ -0.33
ACTB-204ENST00000425660 CD300CQ08708 224 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 NHLRC3Q5JS37 347 aa12.99□□□□□ -0.33
ACTB-204ENST00000425660 MBNL2Q5VZF2 373 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms