RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ABCC11Q96J66 1382 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 WFIKKN1Q96NZ8 548 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 METTL26Q96S19 204 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 CDCA4Q9BXL8 241 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 UGT2B28Q9BY64 529 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 METTL17Q9H7H0 456 aaPredicted RBP3.57□□□□□ -1.84
LSM5-205ENST00000409952 PDS5BQ9NTI5 1447 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 RBFOX1Q9NWB1 397 aaKnown RBP3.57□□□□□ -1.84
LSM5-205ENST00000409952 TP53TG1Q9Y2A0 90 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 ZNF608Q9ULD9 1512 aaPredicted RBP3.56□□□□□ -1.84
LSM5-205ENST00000409952 PLEKHG1Q9ULL1 1385 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.56□□□□□ -1.84
LSM5-205ENST00000409952 A0A0J9YWU9 116 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 RBFOX3A6NFN3 312 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 EFCAB9A8MZ26 197 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 PI15O43692 258 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 NDUFS5O43920 106 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 MMP23AO75900 390 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 SUPT7LO94864 414 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 SOX14O95416 240 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 KLF8O95600 359 aaPredicted RBP3.56□□□□□ -1.84
LSM5-205ENST00000409952 CD74P04233 296 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 TYMSP04818 313 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 BCHEP06276 602 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 CDK1P06493 297 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 TIMM10P62072 90 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 CCL7P80098 99 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 IFITM3Q01628 133 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 CDC20Q12834 499 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 HERPUD1Q15011 391 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 C4orf26Q17RF5 130 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 CLEC12BQ2HXU8 276 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 HLA-DRB5Q30154 266 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 ACSM3Q53FZ2 586 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 SPIN4Q56A73 249 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 TCEAL5Q5H9L2 206 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 KCTD16Q68DU8 428 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 CD200R1LQ6Q8B3 271 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 FAM183BPQ6ZVS7 135 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 FAM19A5Q7Z5A7 132 aaPredicted RBP3.56□□□□□ -1.84
LSM5-205ENST00000409952 RIBC1Q8N443 379 aaPredicted RBP3.56□□□□□ -1.84
LSM5-205ENST00000409952 OR52E4Q8NGH9 312 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 DCUN1D4Q92564 292 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 HGDQ93099 445 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 TCEAL3Q969E4 200 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 TMEM101Q96IK0 257 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 FAAP24Q9BTP7 215 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 TMEM208Q9BTX3 173 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 SFXN3Q9BWM7 321 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 TAPBPLQ9BX59 468 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 BCL2L14Q9BZR8 327 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 METTL9Q9H1A3 318 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 FAM206AQ9NX38 181 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 TMEM9Q9P0T7 183 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 SNX10Q9Y5X0 201 aa3.56□□□□□ -1.84
LSM5-205ENST00000409952 ERCC6Q03468 1493 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 IGHV3-74A0A0B4J1X5 117 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 DAPL1A0PJW8 107 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 SRRM5B3KS81 715 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 ACOX3O15254 700 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 HLA-DPB1P04440 258 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 IGKV5-2P06315 115 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 CRISP2P16562 243 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 APLNRP35414 380 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 DRD3P35462 400 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 IFNGR2P38484 337 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 IDH2P48735 452 aaKnown RBP3.55□□□□□ -1.84
LSM5-205ENST00000409952 ERVS71-1P61550 626 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 LSM6P62312 80 aaKnown RBP3.55□□□□□ -1.84
LSM5-205ENST00000409952 FAM3AP98173 230 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 PRDX1Q06830 199 aaKnown RBP3.55□□□□□ -1.84
LSM5-205ENST00000409952 NAB1Q13506 487 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 FAM53BQ14153 422 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 GINS1Q14691 196 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 CASP8Q14790 479 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 C16orf72Q14CZ0 275 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 RBMY1FQ15415 496 aaKnown RBP3.55□□□□□ -1.84
LSM5-205ENST00000409952 HIGD2BQ4VC39 106 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 C6orf99Q4VX62 202 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 ORMDL2Q53FV1 153 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 HES5Q5TA89 166 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 CLEC19AQ6UXS0 136 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 ACP7Q6ZNF0 438 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 FAM92BQ6ZTR7 304 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 PRSS58Q8IYP2 241 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 C14orf178Q8N769 122 aaPredicted RBP3.55□□□□□ -1.84
LSM5-205ENST00000409952 CCNYL1Q8N7R7 359 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 WDSUB1Q8N9V3 476 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 BLOC1S5Q8TDH9 187 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 RAB8BQ92930 207 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 ANKRD9Q96BM1 317 aaPredicted RBP3.55□□□□□ -1.84
LSM5-205ENST00000409952 TESCQ96BS2 214 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 OR10C1Q96KK4 312 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 QKIQ96PU8 341 aaKnown RBP eCLIP3.55□□□□□ -1.84
LSM5-205ENST00000409952 PLEKHF1Q96S99 279 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 VGLL1Q99990 258 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 DHRS9Q9BPW9 319 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 NUDT9Q9BW91 350 aa3.55□□□□□ -1.84
LSM5-205ENST00000409952 SUCNR1Q9BXA5 334 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms