RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 RFT1Q96AA3 541 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 POM121Q96HA1 1249 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 MS4A5Q9H3V2 200 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 IL36GQ9NZH8 169 aa11.67□□□□□ -0.54
VAPB-202ENST00000395802 DOPEY1Q5JWR5 2465 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 TMEM272A0A1B0GTI8 110 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 H3BUI4 141 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 M0R233 179 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 CSF3P09919 207 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 IL7P13232 177 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 GTF2F2P13984 249 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 SRP9P49458 86 aaKnown RBP11.66□□□□□ -0.54
VAPB-202ENST00000395802 ZNF81P51508 661 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 IL24Q13007 206 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 ALKBH6Q3KRA9 238 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 SLC22A6Q4U2R8 563 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 PYDC2Q56P42 97 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 DMRTC1Q5HYR2 192 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 ASCL4Q6XD76 172 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 Q6ZNX1 250 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 LRP11Q86VZ4 500 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 Q8IYB0 196 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 OR2Z1Q8NG97 314 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 SPOCK3Q9BQ16 436 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 TMEM59Q9BXS4 323 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 OR51I2Q9H344 312 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 MSL2Q9HCI7 577 aa11.66□□□□□ -0.54
VAPB-202ENST00000395802 PLCE1Q9P212 2302 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 IGKV1-27A0A075B6S5 117 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 A0A0G2JMP0 313 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 A0A0X1KG70 313 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 PRSS44E7EML9 344 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 E7EQL1 145 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 TRAPPC2LH3BP13 241 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 MLNRO43193 412 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 CRTAPO75718 401 aaPredicted RBP11.65□□□□□ -0.54
VAPB-202ENST00000395802 CHRM2P08172 466 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 VSIG8P0DPA2 414 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 CD200P41217 278 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 HAGHLQ6PII5 290 aaPredicted RBP11.65□□□□□ -0.54
VAPB-202ENST00000395802 MEX3BQ6ZN04 569 aaKnown RBP11.65□□□□□ -0.54
VAPB-202ENST00000395802 SLC25A26Q70HW3 274 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 CMTM4Q8IZR5 234 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 OR8H2Q8N162 312 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 FBXL14Q8N1E6 418 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 CENPSQ8N2Z9 138 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 OR4M2Q8NGB6 313 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 FBXW5Q969U6 566 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 ELMOD3Q96FG2 381 aa11.65□□□□□ -0.54
VAPB-202ENST00000395802 TMEM14DPA8MWL7 114 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 J3QKU1 62 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 J3QT63 122 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 LDLRAD4O15165 306 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 HLA-DQB1P01920 261 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 MPZP25189 248 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 PITPNBP48739 271 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 SNRPD2P62316 118 aaKnown RBP11.65□□□□□ -0.55
VAPB-202ENST00000395802 ARL6IP1Q15041 203 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 FAM209AQ5JX71 171 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 Q6ZR03 302 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 CALHM1Q8IU99 346 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 MUC15Q8N387 334 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 Q8N402 240 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 OR10AD1Q8NGE0 317 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 DVL3Q92997 716 aaPredicted RBP11.65□□□□□ -0.55
VAPB-202ENST00000395802 ERGIC1Q969X5 290 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 FAM46BQ96A09 425 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 NKX3-1Q99801 234 aaPredicted RBP11.65□□□□□ -0.55
VAPB-202ENST00000395802 NUDT16L1Q9BRJ7 211 aaKnown RBP11.65□□□□□ -0.55
VAPB-202ENST00000395802 EGLN1Q9GZT9 426 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 ATG5Q9H1Y0 275 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 IL19Q9UHD0 177 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 TBC1D24Q9ULP9 559 aa11.65□□□□□ -0.55
VAPB-202ENST00000395802 A0A1W2PQ09 198 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 SPRY1O43609 319 aaPredicted RBP11.64□□□□□ -0.55
VAPB-202ENST00000395802 CDC14BO60729 498 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 UBR5O95071 2799 aaPredicted RBP11.64□□□□□ -0.55
VAPB-202ENST00000395802 PLATP00750 562 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 ADH4P08319 380 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 ACAA1P09110 424 aaPredicted RBP11.64□□□□□ -0.55
VAPB-202ENST00000395802 TNFRSF1AP19438 455 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 SERPINA2P20848 420 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 CPT2P23786 658 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 QRFPP83859 136 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 MSMPQ1L6U9 139 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 PCGF3Q3KNV8 242 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 TMEM69Q5SWH9 247 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 PYHIN1Q6K0P9 492 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 DTX3Q8N9I9 347 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 OR56B1Q8NGI3 324 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 DYNLRB1Q9NP97 96 aa11.64□□□□□ -0.55
VAPB-202ENST00000395802 C17orf100A8MU93 164 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 F5H5P2 479 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 C19orf84I3L1E1 186 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 SIAH2O43255 324 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 XRCC3O43542 346 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 SPRY3O43610 288 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 CTAG2O75638 210 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 PTBP3O95758 552 aaKnown RBP11.63□□□□□ -0.55
VAPB-202ENST00000395802 MPIG6BO95866 241 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms