RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 BHLHA15Q7RTS1 189 aaPredicted RBP13□□□□□ -0.33
SCAF11-204ENST00000395454 C1QL2Q7Z5L3 287 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 APOBEC3DQ96AK3 386 aaPredicted RBP13□□□□□ -0.33
SCAF11-204ENST00000395454 ING3Q9NXR8 418 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 SLC2A8Q9NY64 477 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 ELF5Q9UKW6 265 aaPredicted RBP13□□□□□ -0.33
SCAF11-204ENST00000395454 SPTAN1Q13813 2472 aaKnown RBP13□□□□□ -0.33
SCAF11-204ENST00000395454 ZNF816-ZNF321PA0A0X1KG74 233 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 A8MV72 311 aaPredicted RBP13□□□□□ -0.33
SCAF11-204ENST00000395454 C16orf97H3BN30 126 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 CA11O75493 328 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 MPIG6BO95866 241 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 CYB5AP00167 134 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 HIST1H1DP16402 221 aaKnown RBP13□□□□□ -0.33
SCAF11-204ENST00000395454 NAT1P18440 290 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 TBPP20226 339 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 GRNP28799 593 aaKnown RBP13□□□□□ -0.33
SCAF11-204ENST00000395454 TMEM50BP56557 158 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 RAB1AP62820 205 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 GABRA6Q16445 453 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 METTL11BQ5VVY1 283 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 LHFPL2Q6ZUX7 228 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 STEAP2Q8NFT2 490 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 TNFAIP8L1Q8WVP5 186 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 RNASE6Q93091 150 aaKnown RBP13□□□□□ -0.33
SCAF11-204ENST00000395454 PIGTQ969N2 578 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 S100PBPQ96BU1 408 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 GAL3ST1Q99999 423 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 MED28Q9H204 178 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 OPA3Q9H6K4 179 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 GPR173Q9NS66 373 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 KCNK7Q9Y2U2 307 aa13□□□□□ -0.33
SCAF11-204ENST00000395454 PRR14LQ5THK1 2151 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 IGKV1-27A0A075B6S5 117 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 A0A1W2PP11 408 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 J3QW42 95 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 SSX5O60225 188 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 ZNF735P0CB33 412 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 SULT1A3P0DMM9 295 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 SULT1A4P0DMN0 295 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 CCKARP32238 428 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 CD83Q01151 205 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 TFF3Q07654 80 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 ZMYND11Q15326 602 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 GLDNQ6ZMI3 551 aaPredicted RBP12.99□□□□□ -0.33
SCAF11-204ENST00000395454 CCDC36Q8IYA8 594 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 C1orf162Q8NEQ5 155 aaPredicted RBP12.99□□□□□ -0.33
SCAF11-204ENST00000395454 NANOS1Q8WY41 292 aaKnown RBP12.99□□□□□ -0.33
SCAF11-204ENST00000395454 RAB3CQ96E17 227 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 SELENOIQ9C0D9 397 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 ZMAT3Q9HA38 289 aaKnown RBP12.99□□□□□ -0.33
SCAF11-204ENST00000395454 IL36GQ9NZH8 169 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 FLVCR2Q9UPI3 526 aa12.99□□□□□ -0.33
SCAF11-204ENST00000395454 A0A1W2PR80 420 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 MEIS3P1A6NDR6 274 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 SNRPGP15A8MWD9 76 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 ZNF736B4DX44 427 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 ARPC1BO15143 372 aaKnown RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 CRTAPO75718 401 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 RAB3DO95716 219 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 NRASP01111 189 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 C1QBP02746 253 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 MGMTP16455 207 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 MTCP1P56278 107 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 PLP2Q04941 152 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 MAB21L1Q13394 359 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 SNTB1Q13884 538 aaKnown RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 MEF2DQ14814 521 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 FCN2Q15485 313 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 SLC22A6Q4U2R8 563 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 OR11H7Q8NGC8 314 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 OR51S1Q8NGJ8 323 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 NPRL2Q8WTW4 380 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 OR10A4Q9H209 315 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 MYOZ1Q9NP98 299 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 POU2F3Q9UKI9 436 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 NPTNQ9Y639 398 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 UTP20O75691 2785 aaKnown RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 GCN1Q92616 2671 aaKnown RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 HCFC1P51610 2035 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 C5orf49A4QMS7 147 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 SOCS1O15524 211 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 GNB3P16520 340 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 RBP2P50120 134 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 FUT6P51993 359 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 UBE2NP61088 152 aaKnown RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 GK2Q14410 553 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 ARL6IP1Q15041 203 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 ALKBH2Q6NS38 261 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 ZNF782Q6ZMW2 699 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 SLC36A1Q7Z2H8 476 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 TRAPPC6BQ86SZ2 158 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 NOXA1Q86UR1 476 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 CHST4Q8NCG5 386 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 PXT1Q8NFP0 134 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 OR5D18Q8NGL1 313 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 ST8SIA4Q92187 359 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 ZNF486Q96H40 463 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-204ENST00000395454 Q96M66 194 aa12.98□□□□□ -0.33
SCAF11-204ENST00000395454 SLC25A21Q9BQT8 299 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms