RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 HTR1FP30939 366 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 XKP51811 444 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 DIO3P55073 304 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 HMGCS1Q01581 520 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 TGM3Q08188 693 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 DMTNQ08495 405 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 EGFEM1PQ0D2K5 195 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 BIKQ13323 160 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 CLEC12BQ2HXU8 276 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 TRMT12Q53H54 448 aaKnown RBP4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 CDKL4Q5MAI5 379 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 MED27Q6P2C8 311 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 UQCC3Q6UW78 93 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 NPSR1Q6W5P4 371 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 ACOT7LQ6ZUV0 252 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 HSD17B13Q7Z5P4 300 aaPredicted RBP4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 PPP1R27Q86WC6 154 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 PLCZ1Q86YW0 608 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 CNEP1R1Q8N9A8 125 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 OR5M1Q8NGP8 315 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 OR1L4Q8NGR5 311 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 FNDC9Q8TBE3 224 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 TMEM158Q8WZ71 300 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 CMTM7Q96FZ5 175 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 PGLYRP4Q96LB8 373 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZFP3Q96NJ6 502 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 RNF2Q99496 336 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 ROPN1BQ9BZX4 212 aaPredicted RBP4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 PTGES2Q9H7Z7 377 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 METTL7AQ9H8H3 244 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 ANKRA2Q9H9E1 313 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 RNF122Q9H9V4 155 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 LZTFL1Q9NQ48 299 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 MS4A12Q9NXJ0 267 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZNF226Q9NYT6 803 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 MAT2BQ9NZL9 334 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 COPS3Q9UNS2 423 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 RNF11Q9Y3C5 154 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZNF337Q9Y3M9 751 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 ABCA1O95477 2261 aa4.04□□□□□ -1.76
RNU4-39P-201ENST00000362455 FAM240BA0A1B0GVZ2 78 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 HELTA6NFD8 242 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 SLC22A20A6NK97 555 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 HSPB1P04792 205 aaKnown RBP4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 CRHP06850 196 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 RHOXF2BP0C7M4 288 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 RBMY1CP0DJD4 496 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 CPMP14384 443 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 RPS2P15880 293 aaKnown RBP4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 PSMB1P20618 241 aaKnown RBP4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 PTNP21246 168 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 PPICP45877 212 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 PKNOX1P55347 436 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 GPX6P59796 221 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 RPL23AP62750 156 aaKnown RBP4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 ARL6IP1Q15041 203 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 BCL2A1Q16548 175 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 PGGHGQ32M88 737 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 BEX5Q5H9J7 111 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 OR2A2Q6IF42 318 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 ENPP6Q6UWR7 440 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 ARIH2OSQ8N7S6 290 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 ST8SIA1Q92185 356 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 TMBIM1Q969X1 311 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZNF681Q96N22 645 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 CLCC1Q96S66 551 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 OSBPL11Q9BXB4 747 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 ISG20L2Q9H9L3 353 aaKnown RBP4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 POPDC3Q9HBV1 291 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 LYARQ9NX58 379 aaKnown RBP4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 CD274Q9NZQ7 290 aa4.03□□□□□ -1.76
RNU4-39P-201ENST00000362455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.03□□□□□ -1.77
RNU4-39P-201ENST00000362455 A0A0G2JRQ6 117 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 BTBD17A6NE02 478 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR6C70A6NIJ9 312 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 H0YIV9 168 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 ZNF264O43296 627 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 FADS1O60427 444 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 GCM2O75603 506 aaPredicted RBP4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 CLDN9O95484 217 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 KLK1P06870 262 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 NCF2P19878 526 aaPredicted RBP4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 RAP1GDS1P52306 607 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 ACTR3P61158 418 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 MRPS25P82663 173 aaKnown RBP4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 PLCXD2Q0VAA5 305 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 TSC22D1Q15714 1073 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 NSUN5P1Q3KNT7 163 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 CHRFAM7AQ494W8 412 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 KCTD21Q4G0X4 260 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 C9orf129Q5T035 196 aaKnown RBP4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 C6orf52Q5T4I8 152 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 SLC48A1Q6P1K1 146 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 UNQ9370/PRO34162Q6UXP9 181 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 CMC1Q7Z7K0 106 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 TCAIMQ8N3R3 496 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 FBXO36Q8NEA4 188 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR2M3Q8NG83 312 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR7G1Q8NGA0 311 aa4.02□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR4K14Q8NGD5 310 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms