RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ISYNA1Q9NPH2 558 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 LINC00846Q9NV44 126 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 MED29Q9NX70 200 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 DHCR7Q9UBM7 475 aaKnown RBP1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 TBX21Q9UL17 535 aa1.4□□□□□ -2.19
SMARCAD1-202ENST00000359052 KIAA2026Q5HYC2 2103 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 PLECQ15149 4684 aaKnown RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 A0A096LPK6 155 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 IGKV6D-21A0A0A0MT36 114 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 A0A0J9YY10 115 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 A0A1B0GX78 115 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 ARRDC5A6NEK1 342 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 C12orf71A8MTZ7 269 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 CLDN9O95484 217 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 GAS8O95995 478 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 APOC1P02654 83 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 KRT7P08729 469 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 IGFBP1P08833 259 aaPredicted RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 TDGF1P13385 188 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 CTLA4P16410 223 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 KDELR1P24390 212 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 VBP1P61758 197 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 EMX1Q04741 257 aaPredicted RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 SPRNQ5BIV9 151 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 MESTQ5EB52 335 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 TMEM244Q5VVB8 128 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 MICU2Q8IYU8 434 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 ZNF786Q8N393 782 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 BPIFB6Q8NFQ5 453 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 OR52L1Q8NGH7 329 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 OR6M1Q8NGM8 313 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 OR8D4Q8NGM9 314 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 CASTOR1Q8WTX7 329 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 RAB2BQ8WUD1 216 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 CDS1Q92903 461 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 POM121L2Q96KW2 1035 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 WFIKKN1Q96NZ8 548 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 GNRHR2Q96P88 292 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 NIPSNAP1Q9BPW8 284 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 DHX35Q9H5Z1 703 aaKnown RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 HRASLSQ9HDD0 168 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 SLC17A6Q9P2U8 582 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 CLCF1Q9UBD9 225 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 ZNF225Q9UK10 706 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 PACSIN3Q9UKS6 424 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 MMP17Q9ULZ9 603 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 AK6Q9Y3D8 172 aaKnown RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 TMED3Q9Y3Q3 217 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 A0A087WUU8 490 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 MEIOCA2RUB1 952 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 G3V3Y1 287 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 TPST1O60507 370 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 CCNB2O95067 398 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 C6orf47O95873 294 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 TTLL1O95922 423 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 RPN2P04844 631 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 CST2P09228 141 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 NPSP0C0P6 89 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 OR4A8P0C604 315 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 GZMBP10144 247 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 HSD11B1P28845 292 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 SRIP30626 198 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 MRPS15P82914 257 aaKnown RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 MFAP5Q13361 173 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 TMEM176BQ3YBM2 270 aaPredicted RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 PWWP2BQ6NUJ5 590 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 THOC6Q86W42 341 aaKnown RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 GPBP1Q86WP2 473 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 STX12Q86Y82 276 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 CA13Q8N1Q1 262 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 HIST3H2BBQ8N257 126 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 GATD1Q8NB37 220 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 TMEM37Q8WXS4 190 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 FLYWCH2Q96CP2 140 aaKnown RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 ZBED6CLQ96FA7 236 aaPredicted RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 LINGO1Q96FE5 620 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 C20orf144Q9BQM9 153 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 PPA2Q9H2U2 334 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 VCX3AQ9NNX9 186 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 WWOXQ9NZC7 414 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 MCTS1Q9ULC4 181 aaKnown RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 SLC7A11Q9UPY5 501 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 RNF114Q9Y508 228 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 AGRNO00468 2067 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 A0A1B0GUV1 79 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 H3BTX0 84 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 MBTPS2O43462 519 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 SLC19A2O60779 497 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 CLDN11O75508 207 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 BANF1O75531 89 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 IGHMP01871 453 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 ATP1B1P05026 303 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 BCHEP06276 602 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 CD99P14209 185 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 S100A11P31949 105 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 COPB1P53618 953 aaKnown RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 CCL23P55773 120 aa1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 MAGOHP61326 146 aaKnown RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 HIST1H4AP62805 103 aaKnown RBP1.39□□□□□ -2.19
SMARCAD1-202ENST00000359052 MADCAM1Q13477 382 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms