RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 PLPPR2Q96GM1 343 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 PRRX2Q99811 253 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 NXF2Q9GZY0 626 aaKnown RBP17.13■□□□□ 0.33
CDK13-202ENST00000340829 KCNIP2Q9NS61 270 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 SPINK2P20155 84 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 ACKR3P25106 362 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.13■□□□□ 0.33
CDK13-202ENST00000340829 OR10P1Q8NGE3 313 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 OR8U1Q8NH10 309 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 BOD1Q96IK1 185 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 ADAT1Q9BUB4 502 aaKnown RBP17.13■□□□□ 0.33
CDK13-202ENST00000340829 MEX3AA1L020 520 aaKnown RBP17.13■□□□□ 0.33
CDK13-202ENST00000340829 AQP7P3A6NL99 342 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 M1APQ8TC57 530 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 UCN2Q96RP3 112 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 DUSP15Q9H1R2 295 aaPredicted RBP17.13■□□□□ 0.33
CDK13-202ENST00000340829 SOCS1O15524 211 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 IL3RAP26951 378 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 ASCL1P50553 236 aa17.13■□□□□ 0.33
CDK13-202ENST00000340829 ZNF816Q0VGE8 651 aaPredicted RBP17.13■□□□□ 0.33
CDK13-202ENST00000340829 RAB32Q13637 225 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 ZNF485Q8NCK3 441 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 MED9Q9NWA0 146 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 KCNE5Q9UJ90 142 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 GAB2Q9UQC2 676 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 SSUH2Q9Y2M2 353 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 INHBBP09529 407 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 NOVA1P51513 510 aaKnown RBP17.12■□□□□ 0.33
CDK13-202ENST00000340829 GALMQ96C23 342 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 ZNF501Q96CX3 271 aaPredicted RBP17.12■□□□□ 0.33
CDK13-202ENST00000340829 CASP8AP2Q9UKL3 1982 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 hCG_1809904A0A1W2PP81 198 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 A0A1W2PPE2 198 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 A0A1W2PR64 198 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 A0A1W2PRV1 198 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 RAB19A4D1S5 217 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 MT-ND4LP03901 98 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 SMIM21Q3B7S5 101 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 RGS7BPQ6MZT1 257 aaPredicted RBP17.12■□□□□ 0.33
CDK13-202ENST00000340829 LHX4Q969G2 390 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 AP1S3Q96PC3 154 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 MAP6Q96JE9 813 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 FN3KRPQ9HA64 309 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 RAB18Q9NP72 206 aa17.12■□□□□ 0.33
CDK13-202ENST00000340829 TRAV17A0A0B4J275 112 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 ONECUT2O95948 504 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 EFNB2P52799 333 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 ESRP2Q9H6T0 727 aaKnown RBP17.11■□□□□ 0.33
CDK13-202ENST00000340829 AQP7O14520 342 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 MPC2O95563 127 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 PNLIPP16233 465 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 HES1Q14469 280 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 RXFP4Q8TDU9 374 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 OR2C1O95371 312 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 KLF9Q13886 244 aaPredicted RBP17.11■□□□□ 0.33
CDK13-202ENST00000340829 CISD2Q8N5K1 135 aaKnown RBP17.11■□□□□ 0.33
CDK13-202ENST00000340829 SLC26A10Q8NG04 563 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 PDCD6O75340 191 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 BATFQ16520 125 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 COL13A1Q5TAT6 717 aaPredicted RBP17.11■□□□□ 0.33
CDK13-202ENST00000340829 DEFB124Q8NES8 71 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 OR11H7Q8NGC8 314 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 CLDN23Q96B33 292 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 SHARPINQ9H0F6 387 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 PPP1R3EQ9H7J1 279 aa17.11■□□□□ 0.33
CDK13-202ENST00000340829 AHCTF1Q8WYP5 2266 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 MKRN2OSH3BPM6 223 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 ADAP1O75689 374 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 DUS4LO95620 317 aaKnown RBP17.1■□□□□ 0.33
CDK13-202ENST00000340829 IL34Q6ZMJ4 242 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 OR2M3Q8NG83 312 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 RNF133Q8WVZ7 376 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 PRR13Q9NZ81 148 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 RHOFQ9HBH0 211 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 ZNF355PQ9NSJ1 428 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 FZR1Q9UM11 496 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 ASAH2BP0C7U1 165 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 LSM6P62312 80 aaKnown RBP17.1■□□□□ 0.33
CDK13-202ENST00000340829 KIAA0141Q14154 515 aaPredicted RBP17.1■□□□□ 0.33
CDK13-202ENST00000340829 MPPED2Q15777 294 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 HES3Q5TGS1 186 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 PECRQ9BY49 303 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 ERRFI1Q9UJM3 462 aaPredicted RBP17.1■□□□□ 0.33
CDK13-202ENST00000340829 LYZL6O75951 148 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 MGST1P10620 155 aaKnown RBP17.1■□□□□ 0.33
CDK13-202ENST00000340829 IL11P20809 199 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 FAM58AQ8N1B3 248 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 ERGIC1Q969X5 290 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 IER2Q9BTL4 223 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 LCTP09848 1927 aa17.1■□□□□ 0.33
CDK13-202ENST00000340829 BTBD17A6NE02 478 aa17.09■□□□□ 0.33
CDK13-202ENST00000340829 ARPC4-TTLL3A0A0A6YYG9 625 aa17.09■□□□□ 0.33
CDK13-202ENST00000340829 SPRY3O43610 288 aa17.09■□□□□ 0.33
CDK13-202ENST00000340829 THBS3P49746 956 aa17.09■□□□□ 0.33
CDK13-202ENST00000340829 GGTLC2Q14390 218 aa17.09■□□□□ 0.33
CDK13-202ENST00000340829 ZNF787Q6DD87 383 aa17.09■□□□□ 0.33
CDK13-202ENST00000340829 PATZ1Q9HBE1 687 aaKnown RBP17.09■□□□□ 0.33
CDK13-202ENST00000340829 PCDHGA9Q9Y5G4 932 aaKnown RBP17.09■□□□□ 0.33
CDK13-202ENST00000340829 CLEC18AA5D8T8 446 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms