RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CHRM2P08172 466 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 HIST1H1DP16402 221 aaKnown RBP15.79■□□□□ 0.12
USP39-201ENST00000323701 ATP1B3P54709 279 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 FAM27E3Q08E93 113 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 SIGIRRQ6IA17 410 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 TRAPPC6BQ86SZ2 158 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 CDH24Q86UP0 819 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 LIX1LQ8IVB5 337 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 OR56B4Q8NH76 319 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 LILRB4Q8NHJ6 448 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 SLC25A40Q8TBP6 338 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 HS3ST6Q96QI5 342 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 HEATR1Q9H583 2144 aaKnown RBP15.79■□□□□ 0.12
USP39-201ENST00000323701 F8VVB4 439 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 F8VWA3 439 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 M0QYG6 137 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 CA6P23280 308 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 HLA-DMAP28067 261 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 CALCRP30988 508 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 NPBWR2P48146 333 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 DAZAP2Q15038 168 aaPredicted RBP15.79■□□□□ 0.12
USP39-201ENST00000323701 RSU1Q15404 277 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 CEACAM21Q3KPI0 293 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 OR52W1Q6IF63 320 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 FBXW12Q6X9E4 464 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 ZDHHC23Q8IYP9 409 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 C17orf78Q8N4C9 275 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 ZNF611Q8N823 705 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 Q96M66 194 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 TM2D1Q9BX74 207 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 SCPEP1Q9HB40 452 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 BEX1Q9HBH7 125 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 SULT1C2O00338 296 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 MFNGO00587 321 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 CSF1P09603 554 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 GABRR1P24046 479 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 MPV17P39210 176 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 PIGYQ3MUY2 71 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 UNQ6494/PRO21346Q6UXR6 183 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 SLC25A26Q70HW3 274 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 CSNK2A3Q8NEV1 391 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 OR56B1Q8NGI3 324 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 OR5L1Q8NGL2 311 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 OR1J1Q8NGS3 322 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 OR51F2Q8NH61 342 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 NUDT16L1Q9BRJ7 211 aaKnown RBP15.78■□□□□ 0.12
USP39-201ENST00000323701 URM1Q9BTM9 101 aaKnown RBP15.78■□□□□ 0.12
USP39-201ENST00000323701 TINAGL1Q9GZM7 467 aaPredicted RBP15.78■□□□□ 0.12
USP39-201ENST00000323701 METTL9Q9H1A3 318 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 PLSCR3Q9NRY6 295 aa15.78■□□□□ 0.12
USP39-201ENST00000323701 FAM172BPA6NC97 362 aa15.77■□□□□ 0.12
USP39-201ENST00000323701 A8MXE2 369 aa15.77■□□□□ 0.12
USP39-201ENST00000323701 EEF1E1-BLOC1S5C9J1V9 151 aa15.77■□□□□ 0.12
USP39-201ENST00000323701 HOXD4P09016 255 aaPredicted RBP15.77■□□□□ 0.12
USP39-201ENST00000323701 BLVRBP30043 206 aaPredicted RBP15.77■□□□□ 0.12
USP39-201ENST00000323701 CD83Q01151 205 aa15.77■□□□□ 0.12
USP39-201ENST00000323701 PDCD1Q15116 288 aa15.77■□□□□ 0.12
USP39-201ENST00000323701 TAF9Q16594 264 aa15.77■□□□□ 0.12
USP39-201ENST00000323701 EIF2S3LQ2VIR3 472 aaKnown RBP15.77■□□□□ 0.12
USP39-201ENST00000323701 OR5P3Q8WZ94 311 aa15.77■□□□□ 0.12
USP39-201ENST00000323701 EIF3KQ9UBQ5 218 aaKnown RBP15.77■□□□□ 0.12
USP39-201ENST00000323701 NUBP2Q9Y5Y2 271 aa15.77■□□□□ 0.12
USP39-201ENST00000323701 A0A0A6YYJ9 748 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 ZNF732B4DXR9 585 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 PSMB1P20618 241 aaKnown RBP15.77■□□□□ 0.11
USP39-201ENST00000323701 HAAOP46952 286 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 PSG7Q13046 419 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 MRPL49Q13405 166 aaKnown RBP15.77■□□□□ 0.11
USP39-201ENST00000323701 STEAP1BQ6NZ63 245 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 BTN2A1Q7KYR7 527 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 C6orf201Q7Z4U5 140 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 OR51S1Q8NGJ8 323 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 ZCCHC14Q8WYQ9 949 aaKnown RBP15.77■□□□□ 0.11
USP39-201ENST00000323701 TECTBQ96PL2 329 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 C20orf85Q9H1P6 137 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 OR10A4Q9H209 315 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 OPA3Q9H6K4 179 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 TUBD1Q9UJT1 453 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 FZR1Q9UM11 496 aa15.77■□□□□ 0.11
USP39-201ENST00000323701 FBXL14Q8N1E6 418 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 PECRQ9BY49 303 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 IGHV2OR16-5A0A0B4J2B6 119 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 GEMIN2O14893 280 aaKnown RBP15.76■□□□□ 0.11
USP39-201ENST00000323701 SCGNO76038 276 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 AKAIN1P0CW23 69 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 CCKARP32238 428 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 ACTBP60709 375 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 ACTG1P63261 375 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 SSBP1Q04837 148 aaKnown RBP15.76■□□□□ 0.11
USP39-201ENST00000323701 BRICD5Q6PL45 260 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 BEST4Q8NFU0 473 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 KLF14Q8TD94 323 aaPredicted RBP15.76■□□□□ 0.11
USP39-201ENST00000323701 SNAPC3Q92966 411 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 SLAMF9Q96A28 289 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 MARS2Q96GW9 593 aaKnown RBP15.76■□□□□ 0.11
USP39-201ENST00000323701 TAS2R8Q9NYW2 309 aa15.76■□□□□ 0.11
USP39-201ENST00000323701 NAP1L6A6NFF2 107 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 ANKRD30BLA7E2S9 258 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 MSTNO14793 375 aa15.75■□□□□ 0.11
USP39-201ENST00000323701 SYNGR1O43759 233 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms