RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ANXA10Q9UJ72 324 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 HDGFL3Q9Y3E1 203 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 UNC13CQ8NB66 2214 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 C2CD4DB7Z1M9 353 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 TLX3O43711 291 aaPredicted RBP16.7■□□□□ 0.26
RTN4-201ENST00000317610 KLK2P20151 261 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 FOXL2NBQ6ZUU3 175 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 SEBOXQ9HB31 216 aaPredicted RBP16.7■□□□□ 0.26
RTN4-201ENST00000317610 PLEKHJ1Q9NW61 149 aa16.7■□□□□ 0.26
RTN4-201ENST00000317610 C7orf77A4D0Y5 90 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 MASP2O00187 686 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 MBPP02686 304 aaPredicted RBP16.69■□□□□ 0.26
RTN4-201ENST00000317610 MSR1P21757 451 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 OTX1P32242 354 aaPredicted RBP16.69■□□□□ 0.26
RTN4-201ENST00000317610 AKR1C3P42330 323 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 HIST1H3AP68431 136 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 ENDOGQ14249 297 aaKnown RBP16.69■□□□□ 0.26
RTN4-201ENST00000317610 GUK1Q16774 197 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 HIST2H3PS2Q5TEC6 136 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 HIST2H3AQ71DI3 136 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 RABEPKQ7Z6M1 372 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 GJC3Q8NFK1 279 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 GALNT14Q96FL9 552 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 BSCL2Q96G97 398 aaPredicted RBP16.69■□□□□ 0.26
RTN4-201ENST00000317610 HDHD3Q9BSH5 251 aaPredicted RBP16.69■□□□□ 0.26
RTN4-201ENST00000317610 LIME1Q9H400 295 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 OR5H8P0DN80 308 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 NR2C1P13056 603 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 TMEM187Q14656 261 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 RSPO1Q2MKA7 263 aaPredicted RBP16.69■□□□□ 0.26
RTN4-201ENST00000317610 AKIRIN2Q53H80 203 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 C10orf128Q5T292 105 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 WDR74Q6RFH5 385 aaPredicted RBP16.69■□□□□ 0.26
RTN4-201ENST00000317610 LRTM2Q8N967 370 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 SMRP1Q8NCR6 262 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 NANPQ8TBE9 248 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 WFDC1Q9HC57 220 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 PIGLQ9Y2B2 252 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 MYO7BQ6PIF6 2116 aa16.69■□□□□ 0.26
RTN4-201ENST00000317610 GPR137BO60478 399 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 GLB1P16278 677 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 FKBP2P26885 142 aaKnown RBP16.68■□□□□ 0.26
RTN4-201ENST00000317610 P2RY1P47900 373 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 GPR157Q5UAW9 335 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 PIGTQ969N2 578 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 PIGQQ9BRB3 760 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 ZNF251Q9BRH9 671 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 NELFAQ9H3P2 528 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 RGCCQ9H4X1 137 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 NAA60Q9H7X0 242 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 LUZP4Q9P127 313 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 MYOTQ9UBF9 498 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 METTL1Q9UBP6 276 aaKnown RBP16.68■□□□□ 0.26
RTN4-201ENST00000317610 BORCS7-ASMTA0A0B4J1R7 106 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 GABRR1P24046 479 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 CLDN17P56750 224 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 PIGPP57054 158 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 SLC35A1P78382 337 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 FAM69BQ5VUD6 431 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 LCN10Q6JVE6 187 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 RBMS3Q6XE24 437 aaKnown RBP16.68■□□□□ 0.26
RTN4-201ENST00000317610 FADS6Q8N9I5 356 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 ELL3Q9HB65 397 aaPredicted RBP16.68■□□□□ 0.26
RTN4-201ENST00000317610 HSF4Q9ULV5 492 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 KCNIP3Q9Y2W7 256 aa16.68■□□□□ 0.26
RTN4-201ENST00000317610 F5H5K5 113 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 H7C1Q1 480 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 NME2P1O60361 137 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 SCGB1D2O95969 90 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 GLAP06280 429 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 S100A6P06703 90 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 DTYMKP23919 212 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 ACKR3P25106 362 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 GLP1RP43220 463 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 RAB5CP51148 216 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 TMEM176BQ3YBM2 270 aaPredicted RBP16.67■□□□□ 0.26
RTN4-201ENST00000317610 NKAIN1Q4KMZ8 207 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 HPSE2Q8WWQ2 592 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 TMEM54Q969K7 222 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 NABP1Q96AH0 204 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 PARP12Q9H0J9 701 aaKnown RBP16.67■□□□□ 0.26
RTN4-201ENST00000317610 STRAPQ9Y3F4 350 aaKnown RBP16.67■□□□□ 0.26
RTN4-201ENST00000317610 ZFAND5O76080 213 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 DKK1O94907 266 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 S100A9P06702 114 aaKnown RBP16.67■□□□□ 0.26
RTN4-201ENST00000317610 SNRNP70P08621 437 aaKnown RBP16.67■□□□□ 0.26
RTN4-201ENST00000317610 TMEM225BP0DP42 221 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 SFTPDP35247 375 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 EIF1P41567 113 aaKnown RBP16.67■□□□□ 0.26
RTN4-201ENST00000317610 PLXDC2Q6UX71 529 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 CADM4Q8NFZ8 388 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 MALSU1Q96EH3 234 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 C18orf12Q96KH6 178 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 IP6K3Q96PC2 410 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 SPACA1Q9HBV2 294 aa16.67■□□□□ 0.26
RTN4-201ENST00000317610 A0A1W2PPE3 182 aa16.66■□□□□ 0.26
RTN4-201ENST00000317610 OR5H15A6NDH6 313 aa16.66■□□□□ 0.26
RTN4-201ENST00000317610 SGCEO43556 437 aa16.66■□□□□ 0.26
RTN4-201ENST00000317610 IGHV2-5P01817 119 aa16.66■□□□□ 0.26
RTN4-201ENST00000317610 CSNK1A1P48729 337 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms