RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CYB5R2Q6BCY4 276 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 C9orf40Q8IXQ3 194 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 Q8WTZ3 238 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 C14orf144Q96I85 54 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 SSX3Q99909 188 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 MESP1Q9BRJ9 268 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 ZNF581Q9P0T4 197 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 COPS7AQ9UBW8 275 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 MCTS1Q9ULC4 181 aaKnown RBP12.9□□□□□ -0.34
COL6A2-201ENST00000300527 HDGFL3Q9Y3E1 203 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 MASP2O00187 686 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 OR5H8P0DN80 308 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 ARL4DP49703 201 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 DAP3P51398 398 aaKnown RBP12.9□□□□□ -0.34
COL6A2-201ENST00000300527 HEPN1Q6WQI6 88 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 H1FNTQ75WM6 255 aaPredicted RBP12.9□□□□□ -0.34
COL6A2-201ENST00000300527 TMEM123Q8N131 208 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 GPHA2Q96T91 129 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 PECRQ9BY49 303 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 SUSD2Q9UGT4 822 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 ASXL3Q9C0F0 2248 aa12.9□□□□□ -0.34
COL6A2-201ENST00000300527 A0A087X0M5 115 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 A0A1B0GX30 115 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 A0A1W2PNR3 127 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 A0A1W2PQF6 199 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 KISS1Q15726 138 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 CLEC12BQ2HXU8 276 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 OR11L1Q8NGX0 322 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 SLC39A7Q92504 469 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 FAAP24Q9BTP7 215 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 CYP8B1Q9UNU6 501 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 SLC7A11Q9UPY5 501 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 FRG2CA6NGY1 282 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 E5RGE8 158 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 CST7O76096 145 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 SELLP14151 372 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 SFTPDP35247 375 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 DLK1P80370 383 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 SSX2Q16385 188 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 AKR1C8PQ5T2L2 129 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 SLC22A18ASQ8N1D0 253 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 RTN4IP1Q8WWV3 396 aaPredicted RBP12.89□□□□□ -0.35
COL6A2-201ENST00000300527 NSG2Q9Y328 171 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 HS3ST3B1Q9Y662 390 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 FAM221BA6H8Z2 402 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 ZNF724A8MTY0 619 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 ZNF587BE7ETH6 402 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 PHF1O43189 567 aaPredicted RBP12.89□□□□□ -0.35
COL6A2-201ENST00000300527 GAPDHP04406 335 aaKnown RBP12.89□□□□□ -0.35
COL6A2-201ENST00000300527 SOD3P08294 240 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 TUBG1P23258 451 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 PAX6P26367 422 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 Q3ZCU0 254 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 MRGPRX1Q96LB2 322 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 CHST5Q9GZS9 411 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 AK3Q9UIJ7 227 aa12.89□□□□□ -0.35
COL6A2-201ENST00000300527 IGHV5-51A0A0C4DH38 117 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 BTBD17A6NE02 478 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 F10P00742 488 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 IL15RAQ13261 267 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 HNF4GQ14541 408 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 KHDC3LQ587J8 217 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 LANCL3Q6ZV70 420 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 LHFPL1Q86WI0 220 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 LILRB2Q8N423 598 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 CYB561D1Q8N8Q1 229 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 NTNG2Q96CW9 530 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 LMAN1LQ9HAT1 526 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 IGKV1-9A0A0C4DH69 117 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 ZNF705GA8MUZ8 300 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-201ENST00000300527 THEGLP0DJG4 465 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 IGLV3-21P80748 117 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-201ENST00000300527 RUNX1Q01196 453 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 SLC25A24Q6NUK1 477 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 ZNF429Q86V71 674 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 TUBA4BQ9H853 241 aa12.88□□□□□ -0.35
COL6A2-201ENST00000300527 NSG1A0A0A6YYJ2 146 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 FAM230AA0A1W2PPH8 454 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 ALG1L2C9J202 215 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 ZNF728P0DKX0 622 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 ERVFRD-1P60508 538 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 LRRC18Q8N456 261 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 ADIPOR1Q96A54 375 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 ZDHHC12Q96GR4 267 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 SNX22Q96L94 193 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 C1orf147Q96MC9 270 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-201ENST00000300527 UNKLQ9H9P5 680 aaKnown RBP12.87□□□□□ -0.35
COL6A2-201ENST00000300527 SLCO1B1Q9Y6L6 691 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 KIR2DS5A0A0G2JLQ3 304 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 A0A0G2JNG1 304 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 RBFOX3A6NFN3 312 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 KIR2DS3K7RE56 304 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 SPRY1O43609 319 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-201ENST00000300527 APOBEC1P41238 236 aaKnown RBP12.87□□□□□ -0.35
COL6A2-201ENST00000300527 GABREP78334 506 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 FOXF1Q12946 379 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 GNMTQ14749 295 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 KIR2DS5Q14953 304 aa12.87□□□□□ -0.35
COL6A2-201ENST00000300527 PPA1Q15181 289 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms