RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 Q3ZCU0 254 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 ABCA3Q99758 1704 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 A0A1B0GUH1 482 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 PDGFBP01127 241 aaPredicted RBP15.38■□□□□ 0.05
SHANK1-201ENST00000293441 NTF3P20783 257 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 ZIC1Q15915 447 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 ACSM6Q6P461 480 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 PPP1R1CQ8WVI7 109 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 MOGAT1Q96PD6 335 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 CST7O76096 145 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 PDZD11Q5EBL8 140 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 GAL3ST2Q9H3Q3 398 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 FBXO8Q9NRD0 319 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 H3F3AP84243 136 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 RTP5Q14D33 572 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 LINC00303Q3SY05 128 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 NPEPL1Q8NDH3 523 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 OR5D13Q8NGL4 314 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 DOCK5Q9H7D0 1870 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 OR2J3O76001 311 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 ZNF485Q8NCK3 441 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 AMDHD2Q9Y303 409 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 AMMECR1Q9Y4X0 333 aaPredicted RBP15.38■□□□□ 0.05
SHANK1-201ENST00000293441 HRASP01112 189 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 ADAM5Q6NVV9 412 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 C6orf201Q7Z4U5 140 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 TUSC5Q8IXB3 177 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 ASB10Q8WXI3 467 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 POLR2AP24928 1970 aaKnown RBP15.37■□□□□ 0.05
SHANK1-201ENST00000293441 LRRC3CA6NJW4 275 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 ADAM20O43506 726 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 MMP15P51511 669 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 INSL4Q14641 139 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 IGFBP7Q16270 282 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 SPINK9Q5DT21 86 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 OR13D1Q8NGV5 346 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 DUSP15Q9H1R2 295 aaPredicted RBP15.37■□□□□ 0.05
SHANK1-201ENST00000293441 TRIP12Q14669 1992 aaPredicted RBP15.37■□□□□ 0.05
SHANK1-201ENST00000293441 SNRPGP15A8MWD9 76 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 EML2O95834 649 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 CLEC12BQ2HXU8 276 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 NKX6-2Q9C056 277 aaPredicted RBP15.37■□□□□ 0.05
SHANK1-201ENST00000293441 ZNF768Q9H5H4 540 aaKnown RBP15.37■□□□□ 0.05
SHANK1-201ENST00000293441 ARPC4-TTLL3A0A0A6YYG9 625 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 SSBP1Q04837 148 aaKnown RBP15.37■□□□□ 0.05
SHANK1-201ENST00000293441 RELL2Q8NC24 303 aaPredicted RBP15.37■□□□□ 0.05
SHANK1-201ENST00000293441 MRGPRDQ8TDS7 321 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 OR51I2Q9H344 312 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 C21orf140B9A014 251 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 FOSL1P15407 271 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 S100A4P26447 101 aaKnown RBP15.37■□□□□ 0.05
SHANK1-201ENST00000293441 CALCRP30988 508 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 BAK1Q16611 211 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 TMEM65Q6PI78 240 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 NUBPLQ8TB37 319 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 RAB1CQ92928 201 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 PTHLHP12272 177 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 ZNF416Q9BWM5 594 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 OR2D2Q9H210 308 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 RYDENQ9NUL5 291 aaKnown RBP15.37■□□□□ 0.05
SHANK1-201ENST00000293441 CLEC5AQ9NY25 188 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 PLXNB2O15031 1838 aa15.37■□□□□ 0.05
SHANK1-201ENST00000293441 PYCARD-AS1I3L0S3 204 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 ZNF17P17021 662 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 KIR2DL1P43626 348 aaPredicted RBP15.36■□□□□ 0.05
SHANK1-201ENST00000293441 TMEM128Q5BJH2 165 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 OR2W3Q7Z3T1 314 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 UQCC2Q9BRT2 126 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 AAMDCQ9H7C9 122 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 TMPRSS2O15393 492 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 SPINT1O43278 529 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 KIAA0141Q14154 515 aaPredicted RBP15.36■□□□□ 0.05
SHANK1-201ENST00000293441 D2HGDHQ8N465 521 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 OR2M5A3KFT3 312 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 PPP1R2P9O14990 202 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 FCER1GP30273 86 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 Q6ZNX1 250 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 NUFIP2Q7Z417 695 aaKnown RBP15.36■□□□□ 0.05
SHANK1-201ENST00000293441 hADV38S2A0JD32 116 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 FAM157AC9JC47 383 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 LPAR6P43657 344 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 RAC3P60763 192 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 SPRED2Q7Z698 418 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 SMIM7Q9BQ49 75 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 CTDSP1Q9GZU7 261 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 SIRT3Q9NTG7 399 aaPredicted RBP15.36■□□□□ 0.05
SHANK1-201ENST00000293441 AKR7A2O43488 359 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 MDH2P40926 338 aaKnown RBP15.36■□□□□ 0.05
SHANK1-201ENST00000293441 PRSS42Q7Z5A4 293 aa15.36■□□□□ 0.05
SHANK1-201ENST00000293441 HIST1H1DP16402 221 aaKnown RBP15.35■□□□□ 0.05
SHANK1-201ENST00000293441 CTLA4P16410 223 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 HMGCLL1Q8TB92 370 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 ETFDHQ16134 617 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 SMIM4Q8WVI0 70 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 HGDQ93099 445 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 GLRX2Q9NS18 164 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 GOLT1BQ9Y3E0 138 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 ZNF205O95201 554 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 RAB7AP51149 207 aa15.35■□□□□ 0.05
SHANK1-201ENST00000293441 ENDOGQ14249 297 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms