RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 GPR137Q96N19 417 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 DERL3Q96Q80 235 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 MARVELD1Q9BSK0 173 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 NAA60Q9H7X0 242 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 TAAR3PQ9P1P4 343 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 EXOGQ9Y2C4 368 aaKnown RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 GUSBP08236 651 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 FDX2Q6P4F2 183 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 ZNF66Q6ZN08 573 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 RFLNAQ6ZTI6 216 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 UBE3DQ7Z6J8 389 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 TTC9Q92623 222 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 OR10C1Q96KK4 312 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 MAGT1Q9H0U3 335 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 DCAF16Q9NXF7 216 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 IL20Q9NYY1 176 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 LPAR3Q9UBY5 353 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 A4GNTQ9UNA3 340 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 PROCRQ9UNN8 238 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 DUXBA0A1W2PPF3 345 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 NQO2P16083 231 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 CSNK1EP49674 416 aaKnown RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 C21orf58P58505 322 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 COL9A2Q14055 689 aaPredicted RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 IL13RA2Q14627 380 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 CLPPQ16740 277 aaPredicted RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 ST3GAL2Q16842 350 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 MAMSTRQ6ZN01 415 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 PTOV1Q86YD1 416 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 ZNF687Q8N1G0 1237 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 RELL2Q8NC24 303 aaPredicted RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 ADAT1Q9BUB4 502 aaKnown RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 SH2D2AQ9NP31 389 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 SLC45A2Q9UMX9 530 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 KLF13Q9Y2Y9 288 aaPredicted RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 A0A0B4J2E0 115 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 A0A1B0GX12 115 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 NAT1P18440 290 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 DSCR4P56555 118 aaPredicted RBP4.31□□□□□ -1.72
RC3H1-201ENST00000258349 PKIAP61925 76 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 PPP1CAP62136 330 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ETFDHQ16134 617 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 CCSMST1Q4G0I0 132 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 MRM1Q6IN84 353 aaKnown RBP4.31□□□□□ -1.72
RC3H1-201ENST00000258349 OR10AD1Q8NGE0 317 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 CCDC74AQ96AQ1 378 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 MS4A10Q96PG2 267 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 LRFN3Q9BTN0 628 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 TMEM147Q9BVK8 224 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ZNF835Q9Y2P0 537 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 MED13LQ71F56 2210 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 SERTM1A2A2V5 107 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 IGLV3-25P01717 112 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 PMCHP20382 165 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 TM4SF4P48230 202 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 PPIAP62937 165 aaKnown RBP4.31□□□□□ -1.72
RC3H1-201ENST00000258349 B3GNTL1Q67FW5 361 aaPredicted RBP4.31□□□□□ -1.72
RC3H1-201ENST00000258349 NPAS1Q99742 590 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 EMC6Q9BV81 110 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ADAMTS9Q9P2N4 1935 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 LTBP4Q8N2S1 1624 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 M0R1B8 84 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 KLKB1P03952 638 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 FUT3P21217 361 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 SPCS3P61009 180 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ASTLQ6HA08 431 aaPredicted RBP4.31□□□□□ -1.72
RC3H1-201ENST00000258349 LINC00696Q6ZRV3 163 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 DOLPP1Q86YN1 238 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.31□□□□□ -1.72
RC3H1-201ENST00000258349 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.31□□□□□ -1.72
RC3H1-201ENST00000258349 PCNX3Q9H6A9 2034 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 SLC22A20A6NK97 555 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ADAM20O43506 726 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 FGF17O60258 216 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 CTAG2O75638 210 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ATP6V1FQ16864 119 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 KHDC3LQ587J8 217 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ZC3HAV1LQ96H79 300 aaKnown RBP4.31□□□□□ -1.72
RC3H1-201ENST00000258349 TEX101Q9BY14 249 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 HES4Q9HCC6 221 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 SIRT7Q9NRC8 400 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 MTFP1Q9UDX5 166 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 NAT8BQ9UHF3 227 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 OR51B4Q9Y5P0 310 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ROS1P08922 2347 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 RBFOX3A6NFN3 312 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 SCO1O75880 301 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 DHRS3O75911 302 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 B4GALT1P15291 398 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 TGFBR1P36897 503 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 SLC38A11Q08AI6 406 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ZNF816Q0VGE8 651 aaPredicted RBP4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ZNF385BQ569K4 471 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 PRR27Q6MZM9 219 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 SLC16A12Q6ZSM3 486 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 KLHDC9Q8NEP7 349 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 OR6S1Q8NH40 331 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 SPACA9Q96E40 222 aaPredicted RBP4.31□□□□□ -1.72
RC3H1-201ENST00000258349 ATG101Q9BSB4 218 aa4.31□□□□□ -1.72
RC3H1-201ENST00000258349 PLSCR3Q9NRY6 295 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms