RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 4922502D21RikQ8C634 189 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 CcnqQ8QZR8 250 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Il34Q8R1R4 235 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Tmem242Q8VCR3 140 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Plekhf2Q91WB4 249 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Tm4sf5Q91XF2 196 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cd209cQ91ZW9 178 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 NanpQ9CPT3 248 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Sgo1Q9CXH7 517 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gng13Q9JMF3 67 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr427E9Q7E7 315 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Hprt1P00493 218 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 ApelaP0DMC4 54 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Mmp2P33434 662 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Il9rQ01114 468 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 EndouQ3V188 412 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 C1qtnf12Q8R2Z0 308 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Spaca7Q9D2S4 182 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Erv3Q9DAX3 200 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 FaimQ9WUD8 179 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Tagln2Q9WVA4 199 aaKnown RBP14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr455A0A0B4J1M2 317 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Raet1cO08604 253 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 NgpO08692 167 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ccl22O88430 92 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ube2iP63280 158 aaKnown RBP14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 B4galnt1Q09200 533 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Prss38Q3UKY7 322 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1058Q7TR74 316 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Rell2Q8BRJ3 303 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Zfp459Q8BZ17 267 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Etfrf1Q91V16 86 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Thyn1Q91YJ3 226 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 FrkQ922K9 512 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Pttg1Q9CQJ7 199 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Syt7Q9R0N7 403 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Mtg2A2AFK4 405 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cox5bP19536 128 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cd40P27512 289 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 S1pr2P52592 352 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr733Q14AK5 308 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Dhrs11Q3U0B3 260 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Reep4Q8K072 257 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 RabepkQ8VCH5 380 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr98Q8VFD9 309 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1048Q8VGS2 320 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr378Q8VGT2 314 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ndufa6Q9CQZ5 131 aaKnown RBP14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Exosc8Q9D753 276 aaKnown RBP14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Neu3Q9JMH7 418 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Igkv6-20A0A140T8P2 115 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Dmrta2A2A9A2 531 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 IqckD3YYL3 290 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Srp9P49962 86 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Sult2a2P50236 285 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 LumP51885 338 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Hist1h3bP84228 136 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 PigvQ7TPN3 493 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Rab39bQ8BHC1 213 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Wdfy2Q8BUB4 400 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cryzl1Q921W4 348 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Tnk1Q99ML2 666 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Samt4Q9D4X6 233 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 ShpkQ9D5J6 476 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Dnajc4Q9D844 244 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr945Q9EQB5 319 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 RangrfQ9JIB0 185 aa14.03□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1348F6VB59 318 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Agr2O88312 175 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gsx2P31316 305 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Tle4Q62441 773 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Fbll1Q80WS3 314 aaKnown RBP14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Flrt3Q8BGT1 649 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Vmn1r17Q8R2D8 303 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr168Q8VF05 312 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Slc48a1Q9D8M3 146 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Vmn1r57K7N731 310 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Dusp1P28563 367 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cdk2P97377 346 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 CfiQ61129 603 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ptp4a1Q63739 173 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Mrps10Q80ZK0 160 aaKnown RBP14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Tmem127Q8BGP5 238 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Rrnad1Q8BZG5 475 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Vmn1r8Q8R2C2 303 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr97Q8VFE1 310 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Tmem186Q9CR76 216 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Marveld3Q9D956 376 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr545Q9WU94 316 aa14.02□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 CN725425A0A087WRU1 652 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Prr23a2D3YWX5 253 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Zbtb25G3UW50 439 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 A630095N17RikJ3KMM7 116 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 EbpP70245 230 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Plpp1Q61469 283 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 B430218F22RikQ8BQR5 223 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr732Q8VFT5 308 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Golgb1E9PVZ8 3238 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Trbv23A0A0A6YWQ1 115 aa14.02□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr228A0A1L1SR98 313 aa14.02□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms