RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 RFXANKO14593 260 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 ZW10O43264 779 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 OR7C2O60412 319 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 GMDSO60547 372 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 CRTAPO75718 401 aaPredicted RBP2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 GATBO75879 557 aaKnown RBP2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 CCNB2O95067 398 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 ETHE1O95571 254 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 IGLV7-43P04211 117 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 HOXB8P17481 243 aaPredicted RBP2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 CD40LGP29965 261 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 S100A5P33763 92 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 CRATP43155 626 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 CRISP1P54107 249 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 UBE2G2P60604 165 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 ZNF266Q14584 549 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 TRAM2Q15035 370 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 GABRA6Q16445 453 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 HSDL1Q3SXM5 330 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 CLEC6AQ6EIG7 209 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 PTRHD1Q6GMV3 140 aaKnown RBP2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 ULK3Q6PHR2 472 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 SMARCD3Q6STE5 483 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 RTL4Q6ZR62 310 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 USP50Q70EL3 339 aaPredicted RBP2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 PID1Q7Z2X4 250 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 KRT222Q8N1A0 295 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 RNF10Q8N5U6 811 aaKnown RBP2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 CYB561A3Q8NBI2 242 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 INO80EQ8NBZ0 244 aaPredicted RBP2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 C19orf18Q8NEA5 215 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 OR7G1Q8NGA0 311 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 OR1L1Q8NH94 360 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 CAPSLQ8WWF8 208 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 TNFRSF14Q92956 283 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 HGDQ93099 445 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 FAM131CQ96AQ9 280 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 APH1AQ96BI3 265 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 ECHDC3Q96DC8 303 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 CPB2Q96IY4 423 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 ZNF514Q96K75 400 aaPredicted RBP2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 BTN2A3PQ96KV6 586 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 CSPG4P5Q96PW8 444 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 NAPGQ99747 312 aaPredicted RBP2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 SEC22CQ9BRL7 303 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 UCK2Q9BZX2 261 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 OR52A5Q9H2C5 316 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 LINC00574Q9H8X3 128 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 TMEM165Q9HC07 324 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 RETNQ9HD89 108 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 IL37Q9NZH6 218 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 HMGXB4Q9UGU5 601 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 DDX19BQ9UMR2 479 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 UBN2Q6ZU65 1347 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 C1orf232A0A0U1RR37 186 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 F8VZ95 297 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 PRAMEF26H0Y7S4 382 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 TOR1AO14656 332 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 SLC19A2O60779 497 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 SERPINB7O75635 380 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 CNMDO75829 334 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 BRI3O95415 125 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 MT-ND4P03905 459 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 PFN1P07737 140 aaKnown RBP2□□□□□ -2.09
SCAMP1-205ENST00000614488 KRT16P08779 473 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 RD3LP0DJH9 198 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 INAFM2P0DMQ5 153 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 HTR1DP28221 377 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 POLR2IP36954 125 aaKnown RBP2□□□□□ -2.09
SCAMP1-205ENST00000614488 NBL1P41271 181 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 MRPL19P49406 292 aaKnown RBP2□□□□□ -2.09
SCAMP1-205ENST00000614488 CLDN18P56856 261 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 OR2B6P58173 313 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 TAS2R46P59540 309 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 ATP6V0D1P61421 351 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 RPS15AP62244 130 aaKnown RBP2□□□□□ -2.09
SCAMP1-205ENST00000614488 GNA13Q14344 377 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 MAPRE2Q15555 327 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 PLCZ1Q86YW0 608 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 SGPP2Q8IWX5 399 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 STK40Q8N2I9 435 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 TTC29Q8NA56 475 aaPredicted RBP2□□□□□ -2.09
SCAMP1-205ENST00000614488 OR2Z1Q8NG97 314 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 OR56A4Q8NGH8 313 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 OR5K2Q8NHB8 316 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 CDC26Q8NHZ8 85 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 LYPD6BQ8NI32 183 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 ISOC2Q96AB3 205 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 HAUS1Q96CS2 278 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 CCDC124Q96CT7 223 aaKnown RBP2□□□□□ -2.09
SCAMP1-205ENST00000614488 JSRP1Q96MG2 331 aaPredicted RBP2□□□□□ -2.09
SCAMP1-205ENST00000614488 OPALINQ96PE5 141 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 XPO6Q96QU8 1125 aaKnown RBP2□□□□□ -2.09
SCAMP1-205ENST00000614488 MAP1LC3CQ9BXW4 147 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 BEX2Q9BXY8 128 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 NAA50Q9GZZ1 169 aaKnown RBP2□□□□□ -2.09
SCAMP1-205ENST00000614488 HDHD2Q9H0R4 259 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 PSTPIP2Q9H939 334 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 ZC4H2Q9NQZ6 224 aa2□□□□□ -2.09
SCAMP1-205ENST00000614488 AGPAT4Q9NRZ5 378 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms