RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, human

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-215	ENST00000597649	BOLL	Q8N9W6	283 aa	Known RBP	13.55	□□□□□ -0.24
SHKBP1-215	ENST00000597649	OR52I1	Q8NGK6	324 aa		13.55	□□□□□ -0.24
SHKBP1-215	ENST00000597649	AMELY	Q99218	206 aa		13.55	□□□□□ -0.24
SHKBP1-215	ENST00000597649	PLCXD1	Q9NUJ7	323 aa		13.55	□□□□□ -0.24
SHKBP1-215	ENST00000597649	MRPS18A	Q9NVS2	196 aa	Known RBP	13.55	□□□□□ -0.24
SHKBP1-215	ENST00000597649	CHCHD3	Q9NX63	227 aa	Known RBP	13.55	□□□□□ -0.24
SHKBP1-215	ENST00000597649	RNF7	Q9UBF6	113 aa		13.55	□□□□□ -0.24
SHKBP1-215	ENST00000597649	TPRKB	Q9Y3C4	175 aa		13.55	□□□□□ -0.24
SHKBP1-215	ENST00000597649		M0R135	149 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	PSMD9	O00233	223 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	XPNPEP2	O43895	674 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	ZNF254	O75437	659 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	PTBP3	O95758	552 aa	Known RBP	13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	KRT8	P05787	483 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	ACSM4	P0C7M7	580 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	CA6	P23280	308 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	ANOS1	P23352	680 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	OPRL1	P41146	370 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	PRKX	P51817	358 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	EGR3	Q06889	387 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	DEGS2	Q6QHC5	323 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649		Q6ZPA2	131 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	PLEKHG7	Q6ZR37	379 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	BTN2A1	Q7KYR7	527 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	ZNF679	Q8IYX0	411 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	FGFRL1	Q8N441	504 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	PNLDC1	Q8NA58	520 aa	Known RBP	13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	GGH	Q92820	318 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	ZNF799	Q96GE5	643 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	TMEM80	Q96HE8	168 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	OR8B4	Q96RC9	309 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	NIPAL2	Q9H841	368 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	SP140L	Q9H930	580 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	INPP5E	Q9NRR6	644 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	CNOT2	Q9NZN8	540 aa	Known RBP	13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	MYRF	Q9Y2G1	1151 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	N6AMT1	Q9Y5N5	214 aa		13.54	□□□□□ -0.24
SHKBP1-215	ENST00000597649	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	C5orf63	A6NC05	138 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	PTGES3L	E9PB15	166 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	SLC1A7	O00341	560 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	TSPAN9	O75954	239 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	GYPA	P02724	150 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	LCAT	P04180	440 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	MYL12A	P19105	171 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	DCK	P27707	260 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	CX3CR1	P49238	355 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	RIDA	P52758	137 aa	Known RBP	13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	ROM1	Q03395	351 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	PRB3	Q04118	309 aa	Predicted RBP	13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	ST3GAL4	Q11206	333 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	LAIR2	Q6ISS4	152 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	DRAM2	Q6UX65	266 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	AHSA2	Q719I0	299 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	FAM220A	Q7Z4H9	259 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	YIPF7	Q8N8F6	280 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	SCCPDH	Q8NBX0	429 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	MYDGF	Q969H8	173 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	FGF20	Q9NP95	211 aa	Predicted RBP	13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	PSORS1C1	Q9UIG5	152 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	BLOC1S6	Q9UL45	172 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	LRP12	Q9Y561	859 aa		13.53	□□□□□ -0.24
SHKBP1-215	ENST00000597649	METTL15	A6NJ78	407 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649		J3QRE1	110 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	ALX3	O95076	343 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	ANXA2	P07355	339 aa	Known RBP	13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	CSF1	P09603	554 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	CCDC159	P0C7I6	412 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	PIP	P12273	146 aa	Predicted RBP	13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	ACTA2	P62736	377 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	ACTG2	P63267	376 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	ZNF85	Q03923	595 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	OR8G1	Q15617	311 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	OR8B8	Q15620	311 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	C2orf68	Q2NKX9	166 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	RBM48	Q5RL73	367 aa	Known RBP	13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	KPRP	Q5T749	579 aa	Predicted RBP	13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	GDPGP1	Q6ZNW5	385 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	ZNF826P	Q6ZT77	177 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	SSX6	Q7RTT6	188 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	LHFPL3	Q86UP9	236 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	FAM90A1	Q86YD7	464 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	DPAGT1	Q9H3H5	408 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	CNTD2	Q9H8S5	307 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	FN3KRP	Q9HA64	309 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	BRD7	Q9NPI1	651 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	GNG8	Q9UK08	70 aa		13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	DIMT1	Q9UNQ2	313 aa	Known RBP	13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.52	□□□□□ -0.25
SHKBP1-215	ENST00000597649		A0A1B0GW55	424 aa		13.51	□□□□□ -0.25
SHKBP1-215	ENST00000597649	OOEP	A6NGQ2	149 aa		13.51	□□□□□ -0.25
SHKBP1-215	ENST00000597649	CD300LB	A8K4G0	201 aa		13.51	□□□□□ -0.25
SHKBP1-215	ENST00000597649	DVL1	O14640	695 aa		13.51	□□□□□ -0.25
SHKBP1-215	ENST00000597649	MAGEB4	O15481	346 aa	Predicted RBP	13.51	□□□□□ -0.25
SHKBP1-215	ENST00000597649	TBX1	O43435	398 aa		13.51	□□□□□ -0.25
SHKBP1-215	ENST00000597649	SULT1C4	O75897	302 aa		13.51	□□□□□ -0.25
SHKBP1-215	ENST00000597649	IGHA1	P01876	353 aa		13.51	□□□□□ -0.25
SHKBP1-215	ENST00000597649	DUX4L2	P0CJ85	424 aa		13.51	□□□□□ -0.25
SHKBP1-215	ENST00000597649	DUX4L3	P0CJ86	424 aa		13.51	□□□□□ -0.25
SHKBP1-215	ENST00000597649	DUX4L4	P0CJ87	422 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms