RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 LIPFP07098 398 aa15.3■□□□□ 0.04
SHKBP1-202ENST00000593764 MMP9P14780 707 aa15.3■□□□□ 0.04
SHKBP1-202ENST00000593764 CDONQ4KMG0 1287 aa15.3■□□□□ 0.04
SHKBP1-202ENST00000593764 ANGPTL6Q8NI99 470 aa15.3■□□□□ 0.04
SHKBP1-202ENST00000593764 ZNF48Q96MX3 618 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-202ENST00000593764 GPR173Q9NS66 373 aa15.3■□□□□ 0.04
SHKBP1-202ENST00000593764 GNG8Q9UK08 70 aa15.3■□□□□ 0.04
SHKBP1-202ENST00000593764 SOX21Q9Y651 276 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-202ENST00000593764 PQLC2LA1A4F0 135 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 H3BSH0 61 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 SLC16A6O15403 523 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 ECDO95905 644 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 TFF1P04155 84 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 SELLP14151 372 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 KIR3DL2P43630 455 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 HAGHLQ6PII5 290 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 ZNF788Q6ZQV5 615 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 C9orf139Q6ZV77 190 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 SLC36A1Q7Z2H8 476 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 SIGLECL1Q8N7X8 197 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 ZNF671Q8TAW3 534 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 ST8SIA4Q92187 359 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 LGALS12Q96DT0 336 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 DNTTIP1Q9H147 329 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 DNAJB11Q9UBS4 358 aa15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 RPUSD1Q9UJJ7 312 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-202ENST00000593764 TRAV40A0A0B4J280 105 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 DAPL1A0PJW8 107 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 ZNF879B4DU55 563 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 SFTPBP07988 381 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 GLRA1P23415 457 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 OR12D2P58182 307 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 ACTC1P68032 377 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 ACTA1P68133 377 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 ZNF91Q05481 1191 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 KCTD20Q7Z5Y7 419 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 RDH10Q8IZV5 341 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 ACBD7Q8N6N7 88 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 PNLDC1Q8NA58 520 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 LY6G5BQ8NDX9 201 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 OR2G2Q8NGZ5 317 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 FAM216AQ8WUB2 273 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 GAFA1Q96PS6 74 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 JMJD8Q96S16 334 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 TBX15Q96SF7 602 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 MS4A7Q9GZW8 240 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 NLKQ9UBE8 527 aa15.28■□□□□ 0.04
SHKBP1-202ENST00000593764 IGKV1D-17A0A075B6S4 117 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 A0A1B0GVI7 797 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 SNTNA6NMZ2 147 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 OR2AT4A6NND4 320 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 SYT7O43581 403 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 SYNGR1O43759 233 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 MPZL2O60487 215 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 ACAA1P09110 424 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 DBTP11182 482 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 PSG2P11465 335 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 HAAOP46952 286 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 IKZF1Q13422 519 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 ZSCAN26Q16670 478 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 FDX2Q6P4F2 183 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 FAM220AQ7Z4H9 259 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 ZNF573Q86YE8 665 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 STMN2Q93045 179 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 C1orf147Q96MC9 270 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 WDFY2Q96P53 400 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 ZNF649Q9BS31 505 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 PCGF1Q9BSM1 259 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 SIRPDQ9H106 197 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 AMBNQ9NP70 447 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 FRRS1LQ9P0K9 344 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 ZNF222Q9UK12 451 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 MYRFQ9Y2G1 1151 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 PCDHGB1Q9Y5G3 927 aa15.27■□□□□ 0.04
SHKBP1-202ENST00000593764 ANKRD61A6NGH8 418 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 TRIM77I1YAP6 450 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 GPR37O15354 613 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 SIGLEC5O15389 551 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 NDUFB3O43676 98 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 TOX4O94842 621 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 PGA5P0DJD9 388 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 NANOS3P60323 173 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 ARF6P62330 175 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 UBE2V2Q15819 145 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 DGUOKQ16854 277 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 POC1AQ8NBT0 407 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 CCDC54Q8NEL0 328 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 APH1BQ8WW43 257 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 TMIGD2Q96BF3 282 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 PELI1Q96FA3 418 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 MED30Q96HR3 178 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 ZNF488Q96MN9 340 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 Q96MT0 163 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 CNTD2Q9H8S5 307 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 MRPS18AQ9NVS2 196 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 SMPD3Q9NY59 655 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 RASL12Q9NYN1 266 aa15.26■□□□□ 0.03
SHKBP1-202ENST00000593764 TENM1Q9UKZ4 2725 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 LOC107986453A0A1B0GWG9 222 aa15.25■□□□□ 0.03
SHKBP1-202ENST00000593764 J3QT63 122 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms