RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 ALKBH1Q13686 389 aaKnown RBP13.69□□□□□ -0.22
DNMT1-229ENST00000593049 LYPD2Q6UXB3 125 aa13.69□□□□□ -0.22
DNMT1-229ENST00000593049 ZNF841Q6ZN19 808 aa13.69□□□□□ -0.22
DNMT1-229ENST00000593049 RAB40AQ8WXH6 277 aa13.69□□□□□ -0.22
DNMT1-229ENST00000593049 PP6455Q8WZ26 134 aa13.69□□□□□ -0.22
DNMT1-229ENST00000593049 DNTTIP1Q9H147 329 aa13.69□□□□□ -0.22
DNMT1-229ENST00000593049 GPR173Q9NS66 373 aa13.69□□□□□ -0.22
DNMT1-229ENST00000593049 RASL12Q9NYN1 266 aa13.69□□□□□ -0.22
DNMT1-229ENST00000593049 FRRS1LQ9P0K9 344 aa13.69□□□□□ -0.22
DNMT1-229ENST00000593049 MYRFQ9Y2G1 1151 aa13.69□□□□□ -0.22
DNMT1-229ENST00000593049 POLDIP2Q9Y2S7 368 aa13.69□□□□□ -0.22
DNMT1-229ENST00000593049 AUP1Q9Y679 476 aa13.69□□□□□ -0.22
DNMT1-229ENST00000593049 IGHV2-70DA0A0C4DH43 119 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 J3QT63 122 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 TMPRSS2O15393 492 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 ENSAO43768 121 aaKnown RBP13.68□□□□□ -0.22
DNMT1-229ENST00000593049 CLIC3O95833 236 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 ECDO95905 644 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-229ENST00000593049 CCDC159P0C7I6 412 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 PPIAL4GP0DN37 164 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 GBX2P52951 348 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-229ENST00000593049 SMN1Q16637 294 aaKnown RBP13.68□□□□□ -0.22
DNMT1-229ENST00000593049 ATPAF1Q5TC12 328 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-229ENST00000593049 TMPRSS11AQ6ZMR5 421 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 CNIH3Q8TBE1 160 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 AQP3Q92482 292 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 RNF166Q96A37 237 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-229ENST00000593049 CHST5Q9GZS9 411 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 MMP26Q9NRE1 261 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 HHLA2Q9UM44 414 aa13.68□□□□□ -0.22
DNMT1-229ENST00000593049 ARHGAP32A7KAX9 2087 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 IGHV3OR15-7A0A075B7D8 119 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 PQLC2LA1A4F0 135 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 NKX6-3A6NJ46 265 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 TMEM212A6NML5 194 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 H0YJX3 145 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-229ENST00000593049 GPR37O15354 613 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 AKR7A2O43488 359 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 LIPFP07098 398 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 MYL12AP19105 171 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 GLRA1P23415 457 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 HAAOP46952 286 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 TGM4P49221 684 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 PAX2Q02962 417 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 PAX8Q06710 450 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 CNN3Q15417 329 aaKnown RBP13.67□□□□□ -0.22
DNMT1-229ENST00000593049 HAGHLQ6PII5 290 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-229ENST00000593049 C1orf229Q6ZS94 237 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-229ENST00000593049 ZNF676Q8N7Q3 588 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 TMIGD2Q96BF3 282 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 MED30Q96HR3 178 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 NUDT16L1Q9BRJ7 211 aaKnown RBP13.67□□□□□ -0.22
DNMT1-229ENST00000593049 ZNF649Q9BS31 505 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 PKIBQ9C010 78 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 COMMD4Q9H0A8 199 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 VCX3BQ9H321 246 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 NEK6Q9HC98 313 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 CHCHD3Q9NX63 227 aaKnown RBP13.67□□□□□ -0.22
DNMT1-229ENST00000593049 CTSZQ9UBR2 303 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 OPN4Q9UHM6 478 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 DIMT1Q9UNQ2 313 aaKnown RBP13.67□□□□□ -0.22
DNMT1-229ENST00000593049 CAB39Q9Y376 341 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-229ENST00000593049 EXOSC1Q9Y3B2 195 aaKnown RBP13.67□□□□□ -0.22
DNMT1-229ENST00000593049 MXRA5Q9NR99 2828 aa13.67□□□□□ -0.22
DNMT1-229ENST00000593049 A0A0A6YYJ9 748 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 KIR2DS1A0A191URI9 304 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 EFCAB10A6NFE3 127 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 OR4C45A6NMZ5 311 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 AVPP01185 164 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 ZNF20P17024 532 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 FUT6P51993 359 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 NANOS3P60323 173 aaKnown RBP13.66□□□□□ -0.22
DNMT1-229ENST00000593049 HOXA4Q00056 320 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-229ENST00000593049 CCDC58Q4VC31 144 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 ARMCX4Q5H9R4 360 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 STUMQ69YW2 141 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 RDH10Q8IZV5 341 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 PNLDC1Q8NA58 520 aaKnown RBP13.66□□□□□ -0.22
DNMT1-229ENST00000593049 NLKQ9UBE8 527 aa13.66□□□□□ -0.22
DNMT1-229ENST00000593049 NKX1-2Q9UD57 310 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-229ENST00000593049 A6NIN4 97 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 H0YHG0 523 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 DVL1O14640 695 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 NDUFB3O43676 98 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 NOS1APO75052 506 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-229ENST00000593049 RHBDL1O75783 438 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 ACAA1P09110 424 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-229ENST00000593049 LIMS3P0CW19 117 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 LIMS4P0CW20 117 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 PIPP12273 146 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-229ENST00000593049 EPHA1P21709 976 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 MPZP25189 248 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 SMIM21Q3B7S5 101 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 LRRC10Q5BKY1 277 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 UTS2BQ765I0 119 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 POC1AQ8NBT0 407 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 DNAAF1Q8NEP3 725 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 OR13C3Q8NGS6 347 aa13.65□□□□□ -0.22
DNMT1-229ENST00000593049 OR5AK2Q8NH90 309 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms