RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	SUCLG1	P53597	346 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	CARD18	P57730	90 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	TAS2R41	P59536	307 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	ACTR3	P61158	418 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	RPL27	P61353	136 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	RPS4X	P62701	263 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	SLC35A1	P78382	337 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	CBX1	P83916	185 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	MS4A2	Q01362	244 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	HSF2	Q03933	536 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	PRKCD	Q05655	676 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	CHRNB3	Q05901	458 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	ZP4	Q12836	540 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	FLOT2	Q14254	428 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	TRAM2	Q15035	370 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	NDUFAF6	Q330K2	333 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	SLC25A35	Q3KQZ1	300 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	TMEM41B	Q5BJD5	291 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	C1orf140	Q5VVS0	124 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	HBM	Q6B0K9	141 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	ZFP1	Q6P2D0	407 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	XKRX	Q6PP77	449 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	MBOAT2	Q6ZWT7	520 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	CHMP1B	Q7LBR1	199 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	OLIG3	Q7RTU3	272 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	TSEN54	Q7Z6J9	526 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	CLDN22	Q8N7P3	220 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	OR9Q2	Q8NGE9	314 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	OR6K3	Q8NGY3	331 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	OR10D3	Q8NH80	312 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	PIGX	Q8TBF5	258 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	TMEM239	Q8WW34	195 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	ACOT11	Q8WXI4	607 aa	Predicted RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	TMEM37	Q8WXS4	190 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	DNAJC9	Q8WXX5	260 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	OSTF1	Q92882	214 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	MRPL24	Q96A35	216 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	MCUR1	Q96AQ8	359 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	PINX1	Q96BK5	328 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	SLC25A36	Q96CQ1	311 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	ZHX1-C8orf76	Q96EF9	292 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	NRBF2	Q96F24	287 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	KLHDC3	Q9BQ90	382 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	WFDC6	Q9BQY6	131 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	TTYH2	Q9BSA4	534 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	THTPA	Q9BU02	230 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	NDUFAF3	Q9BU61	184 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	TPPP3	Q9BW30	176 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	TAPBPL	Q9BX59	468 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	EXO5	Q9H790	373 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	NMNAT1	Q9HAN9	279 aa	Predicted RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	CTPS2	Q9NRF8	586 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	YAE1D1	Q9NRH1	226 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	ARMC1	Q9NVT9	282 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	DCAF16	Q9NXF7	216 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	MRPL39	Q9NYK5	338 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	EMC3	Q9P0I2	261 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	STX18	Q9P2W9	335 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	RIMS3	Q9UJD0	308 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	ZNF229	Q9UJW7	825 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	MCTS1	Q9ULC4	181 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	MGAT4B	Q9UQ53	548 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	RASD1	Q9Y272	281 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	MRPS7	Q9Y2R9	242 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	SLC6A5	Q9Y345	797 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	RRP15	Q9Y3B9	282 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	FAM32A	Q9Y421	112 aa	Known RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	KLF2	Q9Y5W3	355 aa	Predicted RBP	2.53	□□□□□ -2
MSI2-215	ENST00000582453	COL6A6	A6NMZ7	2263 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	POLE	Q07864	2286 aa		2.53	□□□□□ -2
MSI2-215	ENST00000582453	CPAMD8	Q8IZJ3	1885 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	LOC400499	M0QZD8	3231 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	SPEN	Q96T58	3664 aa	Known RBP	2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	HELZ2	Q9BYK8	2649 aa	Known RBP	2.52	□□□□□ -2.01
MSI2-215	ENST00000582453		A0A087WUU8	490 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	TRGV8	A0A0C4DH27	118 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	ZNF716	A6NP11	495 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	RPL36A-HNRNPH2	H7BZ11	118 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	SULT2B1	O00204	365 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	CCL21	O00585	134 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	IMPA2	O14732	288 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	SH2D1B	O14796	132 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	LRRTM2	O43300	516 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	CXCL13	O43927	109 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	ENTPD5	O75356	428 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	CIB2	O75838	187 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	PDE5A	O76074	875 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	TOX	O94900	526 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	GADD45G	O95257	159 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	IGHM	P01871	453 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	BGLAP	P02818	100 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	CALCB	P10092	127 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	NR2C1	P13056	603 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	TCN1	P20061	433 aa	Predicted RBP	2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	GSTM3	P21266	225 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	AGTR1	P30556	359 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	FCGR2B	P31994	310 aa	Predicted RBP	2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	OR1E2	P47887	323 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	STAR	P49675	285 aa		2.52	□□□□□ -2.01
MSI2-215	ENST00000582453	P2RY4	P51582	365 aa		2.52	□□□□□ -2.01

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms