RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 GPR148Q8TDV2 347 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 THRSPQ92748 146 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 MEGF10Q96KG7 1140 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 MDFIQ99750 246 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 CHCHD6Q9BRQ6 235 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 RGCCQ9H4X1 137 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 GCM1Q9NP62 436 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 ZNF391Q9UJN7 358 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 HHLA2Q9UM44 414 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 FBN1P35555 2871 aaKnown RBP12.2□□□□□ -0.46
COMMD4-225ENST00000569245 LOC100506127A0A0U1RQW1 187 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 LOC107986453A0A1B0GWG9 222 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 CCDC160A6NGH7 325 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 P2RY10O00398 339 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 TBX1O43435 398 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 BTG1P62324 171 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 ZNF92Q03936 586 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 ODF4Q2M2E3 257 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 GLYATL3Q5SZD4 288 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 DOK3Q7L591 496 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 MOGAT3Q86VF5 341 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 PLPP7Q8NBV4 271 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 OR13C5Q8NGS8 318 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 OR51E1Q8TCB6 317 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 RPL3LQ92901 407 aaKnown RBP12.19□□□□□ -0.46
COMMD4-225ENST00000569245 ITFG2Q969R8 447 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 SPSB4Q96A44 273 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 SGK3Q96BR1 496 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 CENPOQ9BU64 300 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 EXOSC4Q9NPD3 245 aaKnown RBP12.19□□□□□ -0.46
COMMD4-225ENST00000569245 TXNL4BQ9NX01 149 aaKnown RBP12.19□□□□□ -0.46
COMMD4-225ENST00000569245 GSTK1Q9Y2Q3 226 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
COMMD4-225ENST00000569245 A0A1B0GVI7 797 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 C5orf63A6NC05 138 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 LRRC30A6NM36 301 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 CD300LBA8K4G0 201 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 ZNF879B4DU55 563 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 H3BMQ9 156 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 IFNL4K9M1U5 179 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 MLNRO43193 412 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 XRCC2O43543 280 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 SYT7O43581 403 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 IGHV2-70P01814 119 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 OCM2P0CE71 109 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 ZNF12P17014 697 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 CA6P23280 308 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 MAPK3P27361 379 aaPredicted RBP12.18□□□□□ -0.46
COMMD4-225ENST00000569245 OR8G1Q15617 311 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 CEACAM19Q7Z692 300 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 SPICQ8N5J4 248 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 OR10AC1Q8NH08 325 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 C12orf43Q96C57 262 aaKnown RBP12.18□□□□□ -0.46
COMMD4-225ENST00000569245 OR14A2Q96R54 314 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 GPR84Q9NQS5 396 aa12.18□□□□□ -0.46
COMMD4-225ENST00000569245 NOP16Q9Y3C1 178 aaKnown RBP12.18□□□□□ -0.46
COMMD4-225ENST00000569245 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.18□□□□□ -0.462e-10■■■■■ 30.4
COMMD4-225ENST00000569245 TRBV5-7A0A0A0MS05 114 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 RNF212BA8MTL3 300 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 TMEM178BH3BS89 294 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 SLC22A1O15245 554 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 PHF1O43189 567 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-225ENST00000569245 CYB5R3P00387 301 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-225ENST00000569245 UCHL1P09936 223 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 IRF2P14316 349 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 CFL1P23528 166 aaKnown RBP12.17□□□□□ -0.46
COMMD4-225ENST00000569245 LSM3P62310 102 aaKnown RBP12.17□□□□□ -0.46
COMMD4-225ENST00000569245 LCN2P80188 198 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 INSL4Q14641 139 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 ZMYND11Q15326 602 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 C22orf42Q6IC83 251 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 LRRC28Q86X40 367 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-225ENST00000569245 OR51A4Q8NGJ6 313 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 REEP6Q96HR9 211 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 LYZL4Q96KX0 146 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 KCTD7Q96MP8 289 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 DERL3Q96Q80 235 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
COMMD4-225ENST00000569245 SLC22A4Q9H015 551 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 DHDHQ9UQ10 334 aa12.17□□□□□ -0.46
COMMD4-225ENST00000569245 MXRA5Q9NR99 2828 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 CUBNO60494 3623 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 A0A0G2JMP0 313 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 A0A0X1KG70 313 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 DHRS7CA6NNS2 312 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 PIN1P1O15428 100 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 MTRF1O75570 445 aaKnown RBP12.16□□□□□ -0.46
COMMD4-225ENST00000569245 DHRS3O75911 302 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 ARL6IP5O75915 188 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 ZNF205O95201 554 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 CD2P06729 351 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 MDH2P40926 338 aaKnown RBP12.16□□□□□ -0.46
COMMD4-225ENST00000569245 VBP1P61758 197 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 NCS1P62166 190 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 GFOD2Q3B7J2 385 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 TMEM155Q4W5P6 130 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 DCAF12L2Q5VW00 463 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 C1orf87Q8N0U7 546 aa12.16□□□□□ -0.46
COMMD4-225ENST00000569245 MUC20Q8N307 709 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-225ENST00000569245 OR4M2Q8NGB6 313 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms