RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 J3QT63 122 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 M0R1W7 72 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 EBAG9O00559 213 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 SRSF10O75494 262 aaKnown RBP13.85□□□□□ -0.19
USB1-211ENST00000565662 SERPINA3P01011 423 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 ALPLP05186 524 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 EEF1B2P24534 225 aaKnown RBP13.85□□□□□ -0.19
USB1-211ENST00000565662 CFPP27918 469 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 TGM4P49221 684 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 ALDH3A2P51648 485 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 HNRNPA0Q13151 305 aaKnown RBP13.85□□□□□ -0.19
USB1-211ENST00000565662 TMEM42Q69YG0 159 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 ZNF788Q6ZQV5 615 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 LY6G5BQ8NDX9 201 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 SSMEM1Q8WWF3 244 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 RPL3LQ92901 407 aaKnown RBP13.85□□□□□ -0.19
USB1-211ENST00000565662 HRASLS5Q96KN8 279 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 CCL13Q99616 98 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 DCTN5Q9BTE1 182 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 C9orf16Q9BUW7 83 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 SIRPDQ9H106 197 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 SEMA6AQ9H2E6 1030 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 NEK6Q9HC98 313 aa13.85□□□□□ -0.19
USB1-211ENST00000565662 SLC25A10Q9UBX3 287 aaPredicted RBP13.85□□□□□ -0.19
USB1-211ENST00000565662 IGHV3OR15-7A0A075B7D8 119 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 IGHV1-69DA0A0B4J2H0 117 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 hCG_1809904A0A1W2PP81 198 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 A0A1W2PPE2 198 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 A0A1W2PR64 198 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 A0A1W2PRV1 198 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 PSMD9O00233 223 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 SLC1A7O00341 560 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 NOS1APO75052 506 aaPredicted RBP13.84□□□□□ -0.19
USB1-211ENST00000565662 IGHV1-69P01742 117 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 CRYBA1P05813 215 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 ACAA1P09110 424 aaPredicted RBP13.84□□□□□ -0.19
USB1-211ENST00000565662 FAHP16930 419 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 HCCSP53701 268 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 ACTA2P62736 377 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 ACTG2P63267 376 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 MRPL28Q13084 256 aaKnown RBP13.84□□□□□ -0.19
USB1-211ENST00000565662 AWAT1Q58HT5 328 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 C16orf87Q6PH81 154 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 MOB3CQ70IA8 216 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 ZNF561Q8N587 486 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 POC1AQ8NBT0 407 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 ANGPTL6Q8NI99 470 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 PP6455Q8WZ26 134 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 AQP3Q92482 292 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 Q96MT0 163 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 PKIBQ9C010 78 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 UNKLQ9H9P5 680 aaKnown RBP13.84□□□□□ -0.19
USB1-211ENST00000565662 MRM2Q9UI43 246 aaKnown RBP13.84□□□□□ -0.19
USB1-211ENST00000565662 SLC22A13Q9Y226 551 aa13.84□□□□□ -0.19
USB1-211ENST00000565662 BTBD17A6NE02 478 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 SAC3D1A6NKF1 404 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 AKR7A2O43488 359 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 SYT7O43581 403 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 EPHA2P29317 976 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 SNRPGP62308 76 aaKnown RBP13.83□□□□□ -0.2
USB1-211ENST00000565662 MFGE8Q08431 387 aaPredicted RBP13.83□□□□□ -0.2
USB1-211ENST00000565662 CNN3Q15417 329 aaKnown RBP13.83□□□□□ -0.2
USB1-211ENST00000565662 SLC9A3R2Q15599 337 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 CEP78Q5JTW2 689 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 HAGHLQ6PII5 290 aaPredicted RBP13.83□□□□□ -0.2
USB1-211ENST00000565662 SHISA2Q6UWI4 295 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 Q8IYB0 196 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 OR10H4Q8NGA5 316 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 OR5D13Q8NGL4 314 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 PYDC1Q8WXC3 89 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 SDSLQ96GA7 329 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 TBX15Q96SF7 602 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 APOL4Q9BPW4 351 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 DPAGT1Q9H3H5 408 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 METTL8Q9H825 291 aaKnown RBP13.83□□□□□ -0.2
USB1-211ENST00000565662 ONECUT1Q9UBC0 465 aa13.83□□□□□ -0.2
USB1-211ENST00000565662 CENPVL3A0A0U1RRI6 287 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 A0A1W2PQL4 384 aaPredicted RBP13.82□□□□□ -0.2
USB1-211ENST00000565662 ANKRD61A6NGH8 418 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 FBP1P09467 338 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 MPZP25189 248 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 RBMXP38159 391 aaKnown RBP13.82□□□□□ -0.2
USB1-211ENST00000565662 HAAOP46952 286 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 ARF6P62330 175 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 IKZF1Q13422 519 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 TMEM244Q5VVB8 128 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 FIP1L1Q6UN15 594 aaKnown RBP13.82□□□□□ -0.2
USB1-211ENST00000565662 Q6YL49 198 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 CATSPERDQ86XM0 798 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 LDLRAD3Q86YD5 345 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 FAM216BQ8N7L0 139 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 OR14K1Q8NGZ2 314 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 H1FXQ92522 213 aaKnown RBP13.82□□□□□ -0.2
USB1-211ENST00000565662 EME1Q96AY2 570 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 ZNF48Q96MX3 618 aaPredicted RBP13.82□□□□□ -0.2
USB1-211ENST00000565662 FAM234AQ9H0X4 552 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 FAM96BQ9Y3D0 163 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 MMP24Q9Y5R2 645 aa13.82□□□□□ -0.2
USB1-211ENST00000565662 A0A1W2PQ09 198 aa13.81□□□□□ -0.2
USB1-211ENST00000565662 EI24O14681 340 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 304 ms