RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ZNF678Q5SXM1 525 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 CPTPQ5TA50 214 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 VTCN1Q7Z7D3 282 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 CYB561A3Q8NBI2 242 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 Q96MT0 163 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 CHID1Q9BWS9 393 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 MS4A8Q9BY19 250 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 ANGPTL4Q9BY76 406 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 STMN4Q9H169 189 aaPredicted RBP2.76□□□□□ -1.97
LINC00557-201ENST00000563184 TDRD3Q9H7E2 651 aaKnown RBP2.76□□□□□ -1.97
LINC00557-201ENST00000563184 KIR3DX1Q9H7L2 352 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 SND1-IT1Q9HBX3 110 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 IL37Q9NZH6 218 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 RWDD2AQ9UIY3 292 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 JCADQ9P266 1359 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 TRAV8-6A0A0B4J262 113 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 TMEM72A0PK05 275 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 J3QT63 122 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 SNAI1O95863 264 aaPredicted RBP2.75□□□□□ -1.97
LINC00557-201ENST00000563184 PAX6P26367 422 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 GNRHRP30968 328 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 MTPNP58546 118 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 HHATQ5VTY9 493 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 EPGNQ6UW88 154 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 TMEM104Q8NE00 496 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 C1orf64Q8NEQ6 169 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 ZNF649Q9BS31 505 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 CACNA1DQ01668 2161 aa2.75□□□□□ -1.97
LINC00557-201ENST00000563184 SDK2Q58EX2 2172 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 ADGRL1O94910 1474 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 TRAV8-4A0A0B4J246 113 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 A0A1W2PPV4 95 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 CLDN34H7C241 214 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 TRAPPC6AO75865 159 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 P01737 135 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 COL8A2P25067 703 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 MLF1P58340 268 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 RPS11P62280 158 aaKnown RBP eCLIP2.74□□□□□ -1.97
LINC00557-201ENST00000563184 GRB2P62993 217 aaKnown RBP2.74□□□□□ -1.97
LINC00557-201ENST00000563184 DAZ4Q86SG3 579 aaKnown RBP2.74□□□□□ -1.97
LINC00557-201ENST00000563184 SLC26A10Q8NG04 563 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 OR51L1Q8NGJ5 315 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 MRPL48Q96GC5 212 aaKnown RBP2.74□□□□□ -1.97
LINC00557-201ENST00000563184 C1orf50Q9BV19 199 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 DAZ1Q9NQZ3 744 aaKnown RBP2.74□□□□□ -1.97
LINC00557-201ENST00000563184 KIF27Q86VH2 1401 aa2.74□□□□□ -1.97
LINC00557-201ENST00000563184 GMDSO60547 372 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 PLEKHA8P1O95397 391 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 ETHE1O95571 254 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 CRYGCP07315 174 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 GALR1P47211 349 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 SLC35B1P78383 322 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 FLI1Q01543 452 aaPredicted RBP2.73□□□□□ -1.97
LINC00557-201ENST00000563184 C2orf54Q08AI8 447 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 ST3GAL4Q11206 333 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 CALHM3Q86XJ0 350 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 RNF10Q8N5U6 811 aaKnown RBP2.73□□□□□ -1.97
LINC00557-201ENST00000563184 ZNF420Q8TAQ5 688 aaPredicted RBP2.73□□□□□ -1.97
LINC00557-201ENST00000563184 ING5Q8WYH8 240 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 HGDQ93099 445 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 C20orf144Q9BQM9 153 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 RAB22AQ9UL26 194 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 DYSFO75923 2080 aa2.73□□□□□ -1.97
LINC00557-201ENST00000563184 IGLV7-43P04211 117 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 CPN2P22792 545 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 MPIP34949 423 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 TGM4P49221 684 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 ATP6V1FQ16864 119 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 FBXL19-AS1Q494R0 122 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 NKAIN1Q4KMZ8 207 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 FAM104BQ5XKR9 115 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 PDPNQ86YL7 162 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 SGPP2Q8IWX5 399 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 LINC00469Q8N7U9 141 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 OR4A15Q8NGL6 344 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 OR6K6Q8NGW6 343 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 PDCD1LG2Q9BQ51 273 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 SEC22CQ9BRL7 303 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 SHANK2-AS3Q9BTD1 123 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 TBL1XR1Q9BZK7 514 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 ENPP4Q9Y6X5 453 aa2.72□□□□□ -1.97
LINC00557-201ENST00000563184 A0A0G2JMP0 313 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 A0A0X1KG70 313 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 KDELR3O43731 214 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 FSTL3O95633 263 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 IGHV1-46P01743 117 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 MBP02144 154 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 PSMC5P62195 406 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 RPL31P62899 125 aaKnown RBP2.71□□□□□ -1.98
LINC00557-201ENST00000563184 ADIGQ0VDE8 80 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 LINC00303Q3SY05 128 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 TMEM69Q5SWH9 247 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 C16orf87Q6PH81 154 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 FAM131AQ6UXB0 335 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 LINC00337Q8N6G1 96 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 ZNF680Q8NEM1 530 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 OR51A7Q8NH64 312 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 TSNAXQ99598 290 aaKnown RBP2.71□□□□□ -1.98
LINC00557-201ENST00000563184 PRR14LQ5THK1 2151 aa2.71□□□□□ -1.98
LINC00557-201ENST00000563184 NID2Q14112 1375 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms