RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 RPL27P61353 136 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 RAB32Q13637 225 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 ACKR1Q16570 336 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 CCDC54Q8NEL0 328 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 CD300LFQ8TDQ1 290 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 SAP25Q8TEE9 199 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 METTL21AQ8WXB1 218 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 FAM46BQ96A09 425 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 CDX2Q99626 313 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 NDUFAF3Q9BU61 184 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 SIRT7Q9NRC8 400 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 IGHV5-10-1A0A0J9YXX1 117 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 SCRG1O75711 98 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 THBS4P35443 961 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 ZNF84P51523 738 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 FBXW4P57775 412 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 UBE2V2Q15819 145 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 ZNF674Q2M3X9 581 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 KHDC3LQ587J8 217 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 ASPHD2Q6ICH7 369 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 DPY19L4Q7Z388 723 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 DPPA2Q7Z7J5 298 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 OR11A1Q9GZK7 315 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 TXNIPQ9H3M7 391 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 FSCN3Q9NQT6 498 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 PLA2G2EQ9NZK7 142 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 GPR132Q9UNW8 380 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 ASCC3Q8N3C0 2202 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 PRSS37A4D1T9 235 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 K7EPK0 472 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 PLPP3O14495 311 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 HIST1H2BKO60814 126 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 AHSA1O95433 338 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 IGHMP01871 453 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 PMP2P02689 132 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 HIST1H2BJP06899 126 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 FGF7P21781 194 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 HIST1H2BOP23527 126 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 LMO1P25800 156 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 HIST1H2BBP33778 126 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 RPS27P42677 84 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 HIST1H2BDP58876 126 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 HIST1H2BCP62807 126 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 HIST2H2BEQ16778 126 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 MOGAT2Q3SYC2 334 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 VAX1Q5SQQ9 334 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 SLC22A25Q6T423 547 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 UBALD2Q8IYN6 164 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 FAM71E2Q8N5Q1 922 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 TERB2Q8NHR7 220 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 MARCH1Q8TCQ1 289 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 HIST1H2BHQ93079 126 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 OR8B4Q96RC9 309 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 CMKLR1Q99788 373 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 HIST1H2BNQ99877 126 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 HIST1H2BMQ99879 126 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 PTGES2Q9H7Z7 377 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 VSX1Q9NZR4 365 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 RARRES3Q9UL19 164 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 TCFL5Q9UL49 500 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 B9D1Q9UPM9 204 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 ALPK2Q86TB3 2170 aa12.31□□□□□ -0.44
RABGGTA-220ENST00000560998 ANKUB1A6NFN9 424 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 FPR2P25090 351 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 RPL12P30050 165 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 ID4P47928 161 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 ANKRD39Q53RE8 183 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 ZNF385CQ66K41 422 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 CLEC18BQ6UXF7 455 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 OR51F2Q8NH61 342 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 OTOSQ8NHW6 89 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 ST7LQ8TDW4 575 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 THAP3Q8WTV1 239 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 TMEM234Q8WY98 164 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 ROBO4Q8WZ75 1007 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 NTNG2Q96CW9 530 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 CCDC74BQ96LY2 380 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 METTL8Q9H825 291 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 ZMAT3Q9HA38 289 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 TAS2R4Q9NYW5 299 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 FBXL17Q9UF56 701 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 PILRBQ9UKJ0 227 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 ANAPC10Q9UM13 185 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 MRPS18BQ9Y676 258 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 CCDC163A0A0D9SF12 145 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 TRBV11-1A0A0K0K1C0 115 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 C2orf72A6NCS6 295 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 VSTM2BA6NLU5 285 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 A8MWP6 167 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 FTCDNL1E5RQL4 147 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 OR6A2O95222 327 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 ONECUT2O95948 504 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 CRYABP02511 175 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 FOSL2P15408 326 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 NUBP1P53384 320 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 EMP2P54851 167 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 SLC35A1P78382 337 aa12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 INSM1Q01101 510 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-220ENST00000560998 C17orf67Q0P5P2 114 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms