RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 NKX2-5P52952 324 aaPredicted RBP4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 GPX6P59796 221 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 ERVK11-1P61568 191 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 CSNK1G2P78368 415 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 TLE4Q04727 773 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 DGUOKQ16854 277 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 VPS26BQ4G0F5 336 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 CCSMST1Q4G0I0 132 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 HIKESHIQ53FT3 197 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 EIPR1Q53HC9 387 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 C3orf33Q6P1S2 294 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 SSX9Q7RTT3 188 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 PID1Q7Z2X4 250 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 SNX20Q7Z614 316 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 CROCCP2Q86T23 111 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 LKAAEAR1Q8TD35 194 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 MS4A14Q96JA4 679 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 DNAJC1Q96KC8 554 aaKnown RBP4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 ZIM3Q96PE6 472 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 SIGLEC12Q96PQ1 595 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 DUX3Q96PT4 197 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 QKIQ96PU8 341 aaKnown RBP eCLIP4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 GOLPH3Q9H4A6 298 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 PTTG3PQ9NZH4 202 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 ASF1AQ9Y294 204 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 ZNF835Q9Y2P0 537 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 PRELID3BQ9Y3B1 194 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 PCNX1Q96RV3 2341 aa4.78□□□□□ -1.64
TGFBR1-208ENST00000550253 IGLV3-12A0A075B6K2 115 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 TRAV17A0A0B4J275 112 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 A0A1W2PQ72 361 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 ZNF879B4DU55 563 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 H0YJX3 145 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 OR1I1O60431 355 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 SEMA3DO95025 777 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 C1orf105O95561 183 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 DHFRP00374 187 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 TCP1P17987 556 aaKnown RBP4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 BMI1P35226 326 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 CDK9P50750 372 aaKnown RBP4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 VSX2P58304 361 aaPredicted RBP4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 SLC10A1Q14973 349 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 OXA1LQ15070 435 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 KRTAP24-1Q3LI83 254 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 NHLRC3Q5JS37 347 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 OR2G6Q5TZ20 316 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 PTRHD1Q6GMV3 140 aaKnown RBP4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 XKRXQ6PP77 449 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 SLC25A48Q6ZT89 311 aaKnown RBP4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 C18orf65Q6ZTR6 163 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 TMUB2Q71RG4 321 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 NDUFAF7Q7L592 441 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 GABRG1Q8N1C3 465 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 CSNK1G2-AS1Q8NCQ2 148 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 B3GNT7Q8NFL0 401 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 OR56B4Q8NH76 319 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 CAPSLQ8WWF8 208 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 TMIGD2Q96BF3 282 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 DCUN1D1Q96GG9 259 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 PRRC1Q96M27 445 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 MROQ9BYG7 248 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 RACGAP1Q9H0H5 632 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 SPACA1Q9HBV2 294 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 MRPS30Q9NP92 439 aaKnown RBP4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 FGFR1OP2Q9NVK5 253 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 C3orf18Q9UK00 162 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 COPS3Q9UNS2 423 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 ACOT9Q9Y305 439 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 RBMX2Q9Y388 322 aaKnown RBP4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 CNTRLQ7Z7A1 2325 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 FBN1P35555 2871 aaKnown RBP4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 ANKHD1Q8IWZ3 2542 aaKnown RBP4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 SCN2AQ99250 2005 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 hCG_1818297A0A087WSY0 165 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 NSG1A0A0A6YYJ2 146 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 IQCF5A8MTL0 148 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 TEX46H3BTG2 121 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 SAP18O00422 153 aaKnown RBP4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 PSTPIP1O43586 416 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 HCN1O60741 890 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 RENP00797 406 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 SERPINA7P05543 415 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 PRPS2P11908 318 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 RAB3AP20336 220 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 NPR2P20594 1047 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 GSTM3P21266 225 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 NSG1P42857 185 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 PKNOX1P55347 436 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 SPCS3P61009 180 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 FLI1Q01543 452 aaPredicted RBP4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 TFF3Q07654 80 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 MED21Q13503 144 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 TFDP3Q5H9I0 405 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 LEMD1Q68G75 181 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 Q6ZSR3 168 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 H2AFVQ71UI9 128 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 LHFPL3Q86UP9 236 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 NUDCD3Q8IVD9 361 aa4.77□□□□□ -1.65
TGFBR1-208ENST00000550253 RPRMLQ8N4K4 120 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms