RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CRHP06850 196 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 SUMO3P55854 103 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 PLEKHN1Q494U1 663 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 CBLN2Q8IUK8 224 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 ZSCAN4Q8NAM6 433 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 UQCC2Q9BRT2 126 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 HES7Q9BYE0 225 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 BCL2L14Q9BZR8 327 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 NELFAQ9H3P2 528 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 ADAMTS9Q9P2N4 1935 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 BET1O15155 118 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 CD74P04233 296 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 UMODP07911 640 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 CHRM2P08172 466 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 EIF1P41567 113 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 ZNF616Q08AN1 781 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 PLCXD3Q63HM9 321 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 ZFP82Q8N141 532 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 SPTSSAQ969W0 71 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 ZNF629Q9UEG4 869 aaPredicted RBP11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 NUP210LQ5VU65 1888 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 KRBOX1C9JBD0 128 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 H0YIZ8 118 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 GEMIN2O14893 280 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 DUS4LO95620 317 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 OR2A2Q6IF42 318 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 FBXL14Q8N1E6 418 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 NAT6Q93015 286 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 ZC3H10Q96K80 434 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 UTP23Q9BRU9 249 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 CHRNA10Q9GZZ6 450 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 P4HTMQ9NXG6 502 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 HDGFL3Q9Y3E1 203 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 FLVCR1Q9Y5Y0 555 aa11.97□□□□□ -0.49
PRPF40B-209ENST00000548825 CD79AP11912 226 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 RAB6AP20340 208 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 STARD6P59095 220 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 RBM39Q14498 530 aaKnown RBP11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 GUCA2BQ16661 112 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 PAN3Q58A45 887 aaKnown RBP11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 RPL7L1Q6DKI1 246 aaKnown RBP11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 KCNRGQ8N5I3 272 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 OR14K1Q8NGZ2 314 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 MGAQ8IWI9 3026 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 LY6G6EA0A0G2JKS1 128 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 LRP3O75074 770 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 MED6O75586 246 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 OR2F2O95006 317 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 JMJD7P0C870 316 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 PPIAP62937 165 aaKnown RBP11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 GRB2P62993 217 aaKnown RBP11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 OR2F1Q13607 317 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 NAA11Q9BSU3 229 aaPredicted RBP11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 PECRQ9BY49 303 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 U3KQA8 63 aa11.96□□□□□ -0.49
PRPF40B-209ENST00000548825 HPP00738 406 aa11.96□□□□□ -0.5
PRPF40B-209ENST00000548825 PRH1P02810 166 aa11.96□□□□□ -0.5
PRPF40B-209ENST00000548825 OR5H8P0DN80 308 aa11.96□□□□□ -0.5
PRPF40B-209ENST00000548825 RPL35P42766 123 aaKnown RBP11.96□□□□□ -0.5
PRPF40B-209ENST00000548825 FGFBP3Q8TAT2 258 aa11.96□□□□□ -0.5
PRPF40B-209ENST00000548825 C20orf24Q9BUV8 137 aa11.96□□□□□ -0.5
PRPF40B-209ENST00000548825 ALX4Q9H161 411 aaPredicted RBP11.96□□□□□ -0.5
PRPF40B-209ENST00000548825 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.96□□□□□ -0.5
PRPF40B-209ENST00000548825 ZIC3O60481 467 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 DHRS3O75911 302 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 TPT1P13693 172 aaKnown RBP11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 NTF4P34130 210 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 P2RY4P51582 365 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 TAGLNQ01995 201 aaKnown RBP11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 MPPED2Q15777 294 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 HAGHLQ6PII5 290 aaPredicted RBP11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 DNM1P46Q6ZS02 220 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 OR11L1Q8NGX0 322 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 C2CD4CQ8TF44 421 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 TMEM230Q96A57 120 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 SGK3Q96BR1 496 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 IGLV3-12A0A075B6K2 115 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 CDK2AP1O14519 115 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 HLA-HP01893 362 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 LIFP15018 202 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 CPT2P23786 658 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 QRFPP83859 136 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 ECH1Q13011 328 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 ENDOGQ14249 297 aaKnown RBP11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 SLC22A25Q6T423 547 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 BAP18Q8IXM2 172 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 HSD17B11Q8NBQ5 300 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 OR5AP2Q8NGF4 316 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 SLC25A43Q8WUT9 341 aaPredicted RBP11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 PNRC2Q9NPJ4 139 aaKnown RBP11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 RASL12Q9NYN1 266 aa11.95□□□□□ -0.5
PRPF40B-209ENST00000548825 IGHV1-45A0A0A0MS14 117 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 A0A1W2PR80 420 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 CLDN15P56746 228 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 PIGPP57054 158 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 SSBP1Q04837 148 aaKnown RBP11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 SMCO1Q147U7 214 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 SLC25A26Q70HW3 274 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 HOGA1Q86XE5 327 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 TMEM105Q8N8V8 129 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms