RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PRR13Q9NZ81 148 aa4.66□□□□□ -1.66
PROM1-220ENST00000540805 KLK13Q9UKR3 277 aa4.66□□□□□ -1.66
PROM1-220ENST00000540805 HS3ST3A1Q9Y663 406 aa4.66□□□□□ -1.66
PROM1-220ENST00000540805 EML5Q05BV3 1969 aa4.66□□□□□ -1.66
PROM1-220ENST00000540805 HEATR5AQ86XA9 2040 aa4.66□□□□□ -1.66
PROM1-220ENST00000540805 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 A0A1W2PNR3 127 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 PRRG2O14669 202 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 TNFSF12O43508 249 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 IGHV2-5P01817 119 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 ZNF25P17030 456 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 RCC1P18754 421 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 HTR2CP28335 458 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 SERPINF1P36955 418 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 KIR3DL2P43630 455 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 RAB2AP61019 212 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 PMPCAQ10713 525 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 RUNX2Q13950 521 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 EIF2B1Q14232 305 aaKnown RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 ACTBL2Q562R1 376 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 WDR38Q5JTN6 314 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 CDCP2Q5VXM1 449 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 ADGRE4PQ86SQ3 457 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 PRSS35Q8N3Z0 413 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 SECTM1Q8WVN6 248 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 NANOS1Q8WY41 292 aaKnown RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 BSCL2Q96G97 398 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 GPX7Q96SL4 187 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 OPN3Q9H1Y3 402 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 WDR76Q9H967 626 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 CYTL1Q9NRR1 136 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 SLC2A8Q9NY64 477 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 DAPP1Q9UN19 280 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 TIMM8BQ9Y5J9 83 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 WIF1Q9Y5W5 379 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 JMJD1CQ15652 2540 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 ZFYVE26Q68DK2 2539 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 CCDC163A0A0D9SF12 145 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 KLRC4-KLRK1H3BQV0 150 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 PHOX2AO14813 284 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 PHYHO14832 338 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 STK17BO94768 372 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 KNG1P01042 644 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 MT-ND4LP03901 98 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 HOXC4P09017 264 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 FAM157CP0CG43 387 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 AMY2BP19961 511 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 CD80P33681 288 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 CX3CR1P49238 355 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 CARD18P57730 90 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 EIF5AP63241 154 aaKnown RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 CSNK2A1P68400 391 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 GABREP78334 506 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 CCL7P80098 99 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 CYCSP99999 105 aaKnown RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 EGR3Q06889 387 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 C4orf17Q53FE4 359 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 AWAT2Q6E213 333 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 FAM166AQ6J272 317 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 FAHD2BQ6P2I3 314 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 C5orf24Q7Z6I8 188 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 LINC00346Q8IVM7 164 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 CARFQ8N187 725 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 PAQR4Q8N4S7 273 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 KDF1Q8NAX2 398 aaPredicted RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 OR4S1Q8NGB4 309 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 FLVCR1-AS1Q8TAF5 88 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 FAM174AQ8TBP5 190 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 NT5CQ8TCD5 201 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 FAHD2AQ96GK7 314 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 SULT4A1Q9BR01 284 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 NMES1Q9C002 83 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 ZMAT3Q9HA38 289 aaKnown RBP4.65□□□□□ -1.66
PROM1-220ENST00000540805 UCK1Q9HA47 277 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 TMED7Q9Y3B3 224 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 KPTNQ9Y664 436 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 URGCP-MRPS24S4R325 110 aa4.65□□□□□ -1.66
PROM1-220ENST00000540805 A0A087WUJ7 227 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 TRBV6-7A0A0A0MS04 114 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 A0A0A6YYH2 397 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 TMEM269A0A1B0GVZ9 245 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 TMEM235A6NFC5 223 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 A6NJ64 397 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 MFNGO00587 321 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 TNFRSF10CO14798 259 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 PLRG1O43660 514 aaKnown RBP4.65□□□□□ -1.67
PROM1-220ENST00000540805 CRTAPO75718 401 aaPredicted RBP4.65□□□□□ -1.67
PROM1-220ENST00000540805 OR7C1O76099 320 aaPredicted RBP4.65□□□□□ -1.67
PROM1-220ENST00000540805 NKX2-2O95096 273 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 EML2O95834 649 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 CEACAM5P06731 702 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 AKR1C4P17516 323 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 AGAP20933 346 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 GABRR1P24046 479 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 RPS27P42677 84 aaKnown RBP4.65□□□□□ -1.67
PROM1-220ENST00000540805 LSSP48449 732 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 RBP2P50120 134 aa4.65□□□□□ -1.67
PROM1-220ENST00000540805 RPS4XP62701 263 aaKnown RBP4.65□□□□□ -1.67
PROM1-220ENST00000540805 SPOCK1Q08629 439 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms