RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 CCDC90BQ9GZT6 254 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 NEK6Q9HC98 313 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 PPIAL4AQ9Y536 164 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 LRRC42Q9Y546 428 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 TRBV5-5A0A0J9YX44 114 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 hCG_1807616A0A1W2PRN6 198 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 ISPDA4D126 451 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 A6NIN4 97 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 SRRM5B3KS81 715 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 CDIPTO14735 213 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 PRKACBP22694 351 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 MPZP25189 248 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 GZMKP49863 264 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 MED22Q15528 200 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 KCNJ8Q15842 424 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 ZNF404Q494X3 552 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 ZNF826PQ6ZT77 177 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 SVOPQ8N4V2 548 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 MAPK1IP1LQ8NDC0 245 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 OR5D14Q8NGL3 314 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 GAL3ST1Q99999 423 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 POLDIP2Q9Y2S7 368 aa16.31■□□□□ 0.2
DDX55-207ENST00000540763 J3QT63 122 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 LGALS8O00214 317 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 WNT9BO14905 357 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 IGHV2-5P01817 119 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 OCM2P0CE71 109 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 ATF1P18846 271 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 CELP19835 753 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 LMO4P61968 165 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 MLLT11Q13015 90 aaPredicted RBP16.3■□□□□ 0.2
DDX55-207ENST00000540763 DOC2BQ14184 412 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 Q499Y3 187 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 TEX36Q5VZQ5 186 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 ZFP41Q8N8Y5 198 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 ZNF671Q8TAW3 534 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 LRRC29Q8WV35 223 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 AQP3Q92482 292 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 RPL3LQ92901 407 aaKnown RBP16.3■□□□□ 0.2
DDX55-207ENST00000540763 BORCS8Q96FH0 119 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 PKIBQ9C010 78 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 ZCCHC4Q9H5U6 513 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 ZNF665Q9H7R5 613 aa16.3■□□□□ 0.2
DDX55-207ENST00000540763 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.3■□□□□ 0.23e-7■■■■■ 28.2
DDX55-207ENST00000540763 TRAV38-1A0A0B4J264 116 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 IGKV1-9A0A0C4DH69 117 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 ACAA1P09110 424 aaPredicted RBP16.29■□□□□ 0.2
DDX55-207ENST00000540763 IGHV4-31P0DP07 118 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 MUC1P15941 1255 aaPredicted RBP16.29■□□□□ 0.2
DDX55-207ENST00000540763 HAAOP46952 286 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 RBP2P50120 134 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 RPS11P62280 158 aaKnown RBP eCLIP16.29■□□□□ 0.2
DDX55-207ENST00000540763 KRTAP1-1Q07627 177 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 KCTD21Q4G0X4 260 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 ZNF529Q6P280 563 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 LHFPL2Q6ZUX7 228 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 ZNF367Q7RTV3 350 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 MS4A15Q8N5U1 240 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 TMEM106AQ96A25 262 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 C12orf43Q96C57 262 aaKnown RBP16.29■□□□□ 0.2
DDX55-207ENST00000540763 OPALINQ96PE5 141 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 TMEM165Q9HC07 324 aa16.29■□□□□ 0.2
DDX55-207ENST00000540763 OOEPA6NGQ2 149 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 F5H0A9 414 aaPredicted RBP16.28■□□□□ 0.2
DDX55-207ENST00000540763 NDUFA2O43678 99 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 SULT1B1O43704 296 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 CD5LO43866 347 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 NOS1APO75052 506 aaPredicted RBP16.28■□□□□ 0.2
DDX55-207ENST00000540763 AZGP1P25311 298 aaKnown RBP16.28■□□□□ 0.2
DDX55-207ENST00000540763 ATP1B3P54709 279 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 IL24Q13007 206 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 HNRNPA0Q13151 305 aaKnown RBP16.28■□□□□ 0.2
DDX55-207ENST00000540763 TPBGQ13641 420 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 DMRTC1Q5HYR2 192 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 HAGHLQ6PII5 290 aaPredicted RBP16.28■□□□□ 0.2
DDX55-207ENST00000540763 DCDC5Q6ZRR9 648 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 TRMT10AQ8TBZ6 339 aaKnown RBP16.28■□□□□ 0.2
DDX55-207ENST00000540763 UFD1Q92890 307 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 NARFLQ9H6Q4 476 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 PATZ1Q9HBE1 687 aaKnown RBP16.28■□□□□ 0.2
DDX55-207ENST00000540763 ACOT13Q9NPJ3 140 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 MIOXQ9UGB7 285 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 ABCA1O95477 2261 aa16.28■□□□□ 0.2
DDX55-207ENST00000540763 DOCK11Q5JSL3 2073 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 FAM230AA0A1W2PPH8 454 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 FSTP19883 344 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 MAPK3P27361 379 aaPredicted RBP16.27■□□□□ 0.2
DDX55-207ENST00000540763 IL2RGP31785 369 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 FAM201AQ5SY85 155 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 CYB5R2Q6BCY4 276 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 OR13C9Q8NGT0 318 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 FCGR1BQ92637 280 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 CPNE2Q96FN4 548 aaPredicted RBP16.27■□□□□ 0.2
DDX55-207ENST00000540763 MGLLQ99685 303 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 TMEM246Q9BRR3 403 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 METTL17Q9H7H0 456 aaPredicted RBP16.27■□□□□ 0.2
DDX55-207ENST00000540763 RASL12Q9NYN1 266 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 PCDHB10Q9UN67 800 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 LRCH1Q9Y2L9 728 aa16.27■□□□□ 0.2
DDX55-207ENST00000540763 PNMA8CA0A1B0GUJ8 204 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms