RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 SMIM30A4D0T7 59 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 OR5B21A6NL26 309 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 TMEM210A6NLX4 147 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 CYB5R3P00387 301 aaPredicted RBP11.59□□□□□ -0.55
CD44-224ENST00000526669 TNFRSF1AP19438 455 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 PRKACBP22694 351 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 BDKRB2P30411 391 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 RPL5P46777 297 aaKnown RBP11.59□□□□□ -0.55
CD44-224ENST00000526669 HAAOP46952 286 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 FUT6P51993 359 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 ATP1B3P54709 279 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 GMFBP60983 142 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 MZT1Q08AG7 82 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 DDI2Q5TDH0 399 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 GPR107Q5VW38 600 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 ZNF529Q6P280 563 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 HAGHLQ6PII5 290 aaPredicted RBP11.59□□□□□ -0.55
CD44-224ENST00000526669 CD200R1LQ6Q8B3 271 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 ANGPTL5Q86XS5 388 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 CALHM1Q8IU99 346 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 ZNF525Q8N782 197 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 BOLLQ8N9W6 283 aaKnown RBP11.59□□□□□ -0.55
CD44-224ENST00000526669 SCCPDHQ8NBX0 429 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 OR5D18Q8NGL1 313 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 THRSPQ92748 146 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 TECTBQ96PL2 329 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 CENPOQ9BU64 300 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 GSX2Q9BZM3 304 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 METTL17Q9H7H0 456 aaPredicted RBP11.59□□□□□ -0.55
CD44-224ENST00000526669 GCM1Q9NP62 436 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 C1orf123Q9NWV4 160 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 FOXJ3Q9UPW0 622 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 PPP1R3CQ9UQK1 317 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 ABCA2Q9BZC7 2435 aa11.59□□□□□ -0.55
CD44-224ENST00000526669 WNK2Q9Y3S1 2297 aa11.58□□□□□ -0.55
CD44-224ENST00000526669 DSCAML1Q8TD84 2053 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 SHISA3A0PJX4 238 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 LRP5LA4QPB2 252 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 CDIPTO14735 213 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 MAGEB3O15480 346 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 SPRY1O43609 319 aaPredicted RBP11.58□□□□□ -0.56
CD44-224ENST00000526669 SYNGR1O43759 233 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 AIREO43918 545 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 ARL6IP5O75915 188 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 ZNF205O95201 554 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 F12P00748 615 aaPredicted RBP11.58□□□□□ -0.56
CD44-224ENST00000526669 ADRA2CP18825 462 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 SRMP19623 302 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 MYL9P24844 172 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 RBP2P50120 134 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 MTCP1P56278 107 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 FAM201AQ5SY85 155 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 CRIP3Q6Q6R5 217 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 LHFPL2Q6ZUX7 228 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 LRRTM1Q86UE6 522 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 CLVS1Q8IUQ0 354 aaPredicted RBP11.58□□□□□ -0.56
CD44-224ENST00000526669 C11orf53Q8IXP5 236 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 CCL17Q92583 94 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 NINJ1Q92982 152 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 SPSB1Q96BD6 273 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 GPER1Q99527 375 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 OR51I2Q9H344 312 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 FN3KRPQ9HA64 309 aa11.58□□□□□ -0.56
CD44-224ENST00000526669 AK6Q9Y3D8 172 aaKnown RBP11.58□□□□□ -0.56
CD44-224ENST00000526669 KIAA2026Q5HYC2 2103 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 RHBDL1O75783 438 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 EGR1P18146 543 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 CD80P33681 288 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 GATA4P43694 442 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 SLC16A12Q6ZSM3 486 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 JAGN1Q8N5M9 183 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 CELF2-AS1Q8N7Q2 184 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 C19orf18Q8NEA5 215 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 LRRC29Q8WV35 223 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 RDH5Q92781 318 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 ZNF488Q96MN9 340 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 GFI1Q99684 422 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 FAM192AQ9GZU8 254 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 SLITRK2Q9H156 845 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 NEK6Q9HC98 313 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 TMEM138Q9NPI0 162 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 ITGB1BP2Q9UKP3 347 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 GSTK1Q9Y2Q3 226 aa11.57□□□□□ -0.56
CD44-224ENST00000526669 CYSRT1A8MQ03 144 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 J3QT63 122 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 AKR7A2O43488 359 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 ANGPTL7O43827 346 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 RP2O75695 350 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 ALX3O95076 343 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 PTBP3O95758 552 aaKnown RBP11.56□□□□□ -0.56
CD44-224ENST00000526669 CLEC2LP0C7M8 214 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 PAX1P15863 534 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 FGF9P31371 208 aaPredicted RBP11.56□□□□□ -0.56
CD44-224ENST00000526669 OR3A4PP47883 348 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 NCS1P62166 190 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 MXD1Q05195 221 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 KISS1Q15726 138 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 HFEQ30201 348 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 TIMM50Q3ZCQ8 353 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 AVPI1Q5T686 147 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms