RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 HAAOP46952 286 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 FUT6P51993 359 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 BDH1Q02338 343 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 HNRNPA0Q13151 305 aaKnown RBP12.57□□□□□ -0.4
RNF4-210ENST00000508235 MICBQ29980 383 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 ESCO2Q56NI9 601 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 FAM201AQ5SY85 155 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 TEX36Q5VZQ5 186 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 SERPINA12Q8IW75 414 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 ZNF485Q8NCK3 441 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 DNAAF1Q8NEP3 725 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 OR8B3Q8NGG8 313 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 OR5D14Q8NGL3 314 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 GPR148Q8TDV2 347 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 TSEN15Q8WW01 171 aaKnown RBP12.57□□□□□ -0.4
RNF4-210ENST00000508235 FGGYQ96C11 551 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 C12orf43Q96C57 262 aaKnown RBP12.57□□□□□ -0.4
RNF4-210ENST00000508235 ADAT3Q96EY9 351 aaPredicted RBP12.57□□□□□ -0.4
RNF4-210ENST00000508235 OR8B2Q96RD0 313 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 TMEM246Q9BRR3 403 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 FGF23Q9GZV9 251 aaPredicted RBP12.57□□□□□ -0.4
RNF4-210ENST00000508235 TMEM160Q9NX00 188 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 LRCH1Q9Y2L9 728 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 MAP1AP78559 2803 aaPredicted RBP12.57□□□□□ -0.4
RNF4-210ENST00000508235 TRAV20A0A0B4J274 112 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 FAM230AA0A1W2PPH8 454 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 SRRM5B3KS81 715 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 F5H0A9 414 aaPredicted RBP12.56□□□□□ -0.4
RNF4-210ENST00000508235 J3QT63 122 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 DENRO43583 198 aaKnown RBP12.56□□□□□ -0.4
RNF4-210ENST00000508235 RGS10O43665 173 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 CD2P06729 351 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 WNT2P09544 360 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 CRHBPP24387 322 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 CD80P33681 288 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 RBMXP38159 391 aaKnown RBP12.56□□□□□ -0.4
RNF4-210ENST00000508235 UBE2V2Q15819 145 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 DMKNQ6E0U4 476 aaPredicted RBP12.56□□□□□ -0.4
RNF4-210ENST00000508235 SFRP4Q6FHJ7 346 aaPredicted RBP12.56□□□□□ -0.4
RNF4-210ENST00000508235 XAF1Q6GPH4 301 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 HAGHLQ6PII5 290 aaPredicted RBP12.56□□□□□ -0.4
RNF4-210ENST00000508235 PARP16Q8N5Y8 322 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 DEFB108BQ8NET1 73 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 OR51A4Q8NGJ6 313 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 AQP3Q92482 292 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 TMEM186Q96B77 213 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 SPSB1Q96BD6 273 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 BORCS8Q96FH0 119 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 NEIL1Q96FI4 390 aaPredicted RBP12.56□□□□□ -0.4
RNF4-210ENST00000508235 PKIBQ9C010 78 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 DUSP21Q9H596 190 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 METTL17Q9H7H0 456 aaPredicted RBP12.56□□□□□ -0.4
RNF4-210ENST00000508235 DNAJB11Q9UBS4 358 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 ZNF281Q9Y2X9 895 aa12.56□□□□□ -0.4
RNF4-210ENST00000508235 C3orf80F5H4A9 247 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 ATF1P18846 271 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 GATA3P23771 443 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 NPY4RP50391 375 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 ATP1B3P54709 279 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 ACSM1Q08AH1 577 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 YIF1BQ5BJH7 314 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 DMRTC1Q5HYR2 192 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 LHFPL2Q6ZUX7 228 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 OR10AC1Q8NH08 325 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 TRMT10AQ8TBZ6 339 aaKnown RBP12.55□□□□□ -0.4
RNF4-210ENST00000508235 THRSPQ92748 146 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 SSBP3Q9BWW4 388 aaPredicted RBP12.55□□□□□ -0.4
RNF4-210ENST00000508235 ZCCHC4Q9H5U6 513 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 PAK1IP1Q9NWT1 392 aaPredicted RBP12.55□□□□□ -0.4
RNF4-210ENST00000508235 RASL12Q9NYN1 266 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 LPAR3Q9UBY5 353 aa12.55□□□□□ -0.4
RNF4-210ENST00000508235 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.54□□□□□ -0.45e-7■■■■■ 32
RNF4-210ENST00000508235 DOCK11Q5JSL3 2073 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 PPIAL4CA0A0B4J2A2 164 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 A8MXK9 166 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 AKR7A2O43488 359 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 PLPP2O43688 288 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 RHBDL1O75783 438 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 ALX3O95076 343 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 MT-ND2P03891 347 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 CD1AP06126 327 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 EGR1P18146 543 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 HNF1AP20823 631 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 GLRA1P23415 457 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 EEF1B2P24534 225 aaKnown RBP12.54□□□□□ -0.4
RNF4-210ENST00000508235 AZGP1P25311 298 aaKnown RBP12.54□□□□□ -0.4
RNF4-210ENST00000508235 RBP2P50120 134 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 GNB2P62879 340 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 IL24Q13007 206 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 SPHARQ15513 63 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 PRSS48Q7RTY5 328 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 FAM90A1Q86YD7 464 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 POC1AQ8NBT0 407 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 C19orf18Q8NEA5 215 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 NPRL2Q8WTW4 380 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 GHSRQ92847 366 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 TMIGD2Q96BF3 282 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 CPNE2Q96FN4 548 aaPredicted RBP12.54□□□□□ -0.4
RNF4-210ENST00000508235 CCDC90BQ9GZT6 254 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 LPAR2Q9HBW0 351 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms