RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PPP1R3BQ86XI6 285 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 ADPRHL1Q8NDY3 354 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 OR1N1Q8NGS0 311 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 OR2AJ1Q8NGZ0 328 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 OR14K1Q8NGZ2 314 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 CD300LFQ8TDQ1 290 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 NTNG2Q96CW9 530 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 GAS2L1Q99501 681 aaPredicted RBP15.59■□□□□ 0.09
NUP54-205ENST00000507257 COPS7AQ9UBW8 275 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 PADI1Q9ULC6 663 aa15.59■□□□□ 0.09
NUP54-205ENST00000507257 IFITM10A6NMD0 228 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 SEC14L6B5MCN3 397 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 RPL36A-HNRNPH2H7BZ11 118 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 ETV2O00321 342 aaPredicted RBP15.58■□□□□ 0.09
NUP54-205ENST00000507257 F10P00742 488 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 GIMD1P0DJR0 217 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 ZNF43P17038 809 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 CTSSP25774 331 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 FASLGP48023 281 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 DEFA6Q01524 100 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 C9orf50Q5SZB4 431 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 ZNF574Q6ZN55 896 aaPredicted RBP15.58■□□□□ 0.09
NUP54-205ENST00000507257 SUMF2Q8NBJ7 301 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 OR13D1Q8NGV5 346 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 DDIT4LQ96D03 193 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 ZNF2Q9BSG1 426 aaPredicted RBP15.58■□□□□ 0.09
NUP54-205ENST00000507257 SUCNR1Q9BXA5 334 aa15.58■□□□□ 0.09
NUP54-205ENST00000507257 TLCD2A6NGC4 264 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 LILRA5A6NI73 299 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 LIPT2A6NK58 231 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 NDUFS6O75380 124 aaKnown RBP15.58■□□□□ 0.08
NUP54-205ENST00000507257 PRH1P02810 166 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 CTSEP14091 401 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 NME1P15531 152 aaKnown RBP15.58■□□□□ 0.08
NUP54-205ENST00000507257 ZNF133P52736 654 aaPredicted RBP15.58■□□□□ 0.08
NUP54-205ENST00000507257 BIDP55957 195 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 TMEM187Q14656 261 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 KISS1Q15726 138 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 Q6ZSR3 168 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 MR1Q95460 341 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 PARP12Q9H0J9 701 aaKnown RBP15.58■□□□□ 0.08
NUP54-205ENST00000507257 HIPK2Q9H2X6 1198 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 SIRT7Q9NRC8 400 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 SERINC1Q9NRX5 453 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 FBXO7Q9Y3I1 522 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 ADAMTS9Q9P2N4 1935 aa15.58■□□□□ 0.08
NUP54-205ENST00000507257 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.57■□□□□ 0.08
NUP54-205ENST00000507257 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.57■□□□□ 0.08
NUP54-205ENST00000507257 AFF3P51826 1226 aaKnown RBP15.57■□□□□ 0.08
NUP54-205ENST00000507257 GRB2P62993 217 aaKnown RBP15.57■□□□□ 0.08
NUP54-205ENST00000507257 GABREP78334 506 aa15.57■□□□□ 0.08
NUP54-205ENST00000507257 FZD2Q14332 565 aa15.57■□□□□ 0.08
NUP54-205ENST00000507257 TMEM240Q5SV17 173 aa15.57■□□□□ 0.08
NUP54-205ENST00000507257 COMMD2Q86X83 199 aa15.57■□□□□ 0.08
NUP54-205ENST00000507257 NOXO1Q8NFA2 376 aa15.57■□□□□ 0.08
NUP54-205ENST00000507257 BSCL2Q96G97 398 aaPredicted RBP15.57■□□□□ 0.08
NUP54-205ENST00000507257 NAA60Q9H7X0 242 aa15.57■□□□□ 0.08
NUP54-205ENST00000507257 PNRC2Q9NPJ4 139 aaKnown RBP15.57■□□□□ 0.08
NUP54-205ENST00000507257 ZNF319Q9P2F9 582 aa15.57■□□□□ 0.08
NUP54-205ENST00000507257 B3GAT1Q9P2W7 334 aa15.57■□□□□ 0.08
NUP54-205ENST00000507257 ATG2AQ2TAZ0 1938 aa15.57■□□□□ 0.08
NUP54-205ENST00000507257 ARID1BQ8NFD5 2236 aaPredicted RBP15.57■□□□□ 0.08
NUP54-205ENST00000507257 ELOA3CA0A087WX78 387 aaPredicted RBP15.56■□□□□ 0.08
NUP54-205ENST00000507257 FOSL2P15408 326 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 HIST1H1BP16401 226 aaKnown RBP15.56■□□□□ 0.08
NUP54-205ENST00000507257 BLKP51451 505 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 CCDC54Q8NEL0 328 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 FAM71F1Q96KD3 344 aaPredicted RBP15.56■□□□□ 0.08
NUP54-205ENST00000507257 C18orf12Q96KH6 178 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 SOX7Q9BT81 388 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 UFSP2Q9NUQ7 469 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 ANXA10Q9UJ72 324 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 LAMA2P24043 3122 aaKnown RBP15.56■□□□□ 0.08
NUP54-205ENST00000507257 DHRS7CA6NNS2 312 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 YIF1AO95070 293 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 DUSP1P28562 367 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 RPS10P46783 165 aaKnown RBP15.56■□□□□ 0.08
NUP54-205ENST00000507257 OR1D4P47884 311 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 FHITP49789 147 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 C17orf67Q0P5P2 114 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 LCN10Q6JVE6 187 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 SLC25A47Q6Q0C1 308 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 PARM1Q6UWI2 310 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 ZNF610Q8N9Z0 462 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 AKR7LQ8NHP1 331 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 DOK5Q9P104 306 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 POLR1DQ9Y2S0 133 aa15.56■□□□□ 0.08
NUP54-205ENST00000507257 NSG1A0A0A6YYJ2 146 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 H3BMH7 237 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 SCGB1D2O95969 90 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 IGHG1P01857 330 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 PGA4P0DJD7 388 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 PGA3P0DJD8 388 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 OR13C7P0DN81 318 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 C14orf28Q4W4Y0 310 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 ZNF542PQ5EBM4 170 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 SP5Q6BEB4 398 aaPredicted RBP15.55■□□□□ 0.08
NUP54-205ENST00000507257 SLC38A9Q8NBW4 561 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 APCDD1LQ8NCL9 501 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 PP6455Q8WZ26 134 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms