RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 ZNF665Q9H7R5 613 aa9.33□□□□□ -0.92
APTX-230ENST00000494649 TMEM165Q9HC07 324 aa9.33□□□□□ -0.92
APTX-230ENST00000494649 PPIAL4AQ9Y536 164 aa9.33□□□□□ -0.92
APTX-230ENST00000494649 A0A1B0GW55 424 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 OGG1O15527 345 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 PHF1O43189 567 aaPredicted RBP9.32□□□□□ -0.92
APTX-230ENST00000494649 PTBP3O95758 552 aaKnown RBP9.32□□□□□ -0.92
APTX-230ENST00000494649 SERPINA3P01011 423 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 TGFAP01135 160 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 DUX4L2P0CJ85 424 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 DUX4L3P0CJ86 424 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 DUX4L4P0CJ87 422 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 DUX4L5P0CJ88 424 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 DUX4L6P0CJ89 424 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 DUX4L7P0CJ90 424 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 CALCBP10092 127 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 LMO4P61968 165 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 MRPL28Q13084 256 aaKnown RBP9.32□□□□□ -0.92
APTX-230ENST00000494649 ZBTB37Q5TC79 503 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 DMKNQ6E0U4 476 aaPredicted RBP9.32□□□□□ -0.92
APTX-230ENST00000494649 DUX4L9Q6RFH8 374 aaPredicted RBP9.32□□□□□ -0.92
APTX-230ENST00000494649 Q6ZSR3 168 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 C1orf87Q8N0U7 546 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 OR5A2Q8NGI9 324 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 OR51A2Q8NGJ7 313 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 Q8TCH9 128 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 HPS1Q92902 700 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 TMEM203Q969S6 136 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 TMEM106AQ96A25 262 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 OR14A2Q96R54 314 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 TMEM246Q9BRR3 403 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 TMED9Q9BVK6 235 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 RASSF4Q9H2L5 321 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 TAS2R4Q9NYW5 299 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 DUX4Q9UBX2 424 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 LSM2Q9Y333 95 aaKnown RBP9.32□□□□□ -0.92
APTX-230ENST00000494649 ARHGAP32A7KAX9 2087 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 SONP18583 2426 aaKnown RBP9.32□□□□□ -0.92
APTX-230ENST00000494649 PQLC2LA1A4F0 135 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 DHRS7CA6NNS2 312 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 CEACAM18A8MTB9 384 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 POU3F4P49335 361 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 LCN2P80188 198 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 IRF3Q14653 427 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 LIPKQ5VXJ0 399 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 ASPHD2Q6ICH7 369 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 PRSS48Q7RTY5 328 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 LRRC28Q86X40 367 aaPredicted RBP9.32□□□□□ -0.92
APTX-230ENST00000494649 FAM90A1Q86YD7 464 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 GPR148Q8TDV2 347 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 ERGIC1Q969X5 290 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 BORCS8Q96FH0 119 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 YAE1D1Q9NRH1 226 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 BLOC1S6Q9UL45 172 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 SLC7A11Q9UPY5 501 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 ZNF281Q9Y2X9 895 aa9.32□□□□□ -0.92
APTX-230ENST00000494649 YLPM1P49750 1951 aaKnown RBP9.31□□□□□ -0.92
APTX-230ENST00000494649 CUBNO60494 3623 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 OR5B21A6NL26 309 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 TMEM210A6NLX4 147 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.31□□□□□ -0.92
APTX-230ENST00000494649 SPRY1O43609 319 aaPredicted RBP9.31□□□□□ -0.92
APTX-230ENST00000494649 GATBO75879 557 aaKnown RBP9.31□□□□□ -0.92
APTX-230ENST00000494649 IGHV2-5P01817 119 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 HCKP08631 526 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 RPS2P15880 293 aaKnown RBP9.31□□□□□ -0.92
APTX-230ENST00000494649 ZNF12P17014 697 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 AZGP1P25311 298 aaKnown RBP9.31□□□□□ -0.92
APTX-230ENST00000494649 MDH2P40926 338 aaKnown RBP9.31□□□□□ -0.92
APTX-230ENST00000494649 RPS11P62280 158 aaKnown RBP eCLIP9.31□□□□□ -0.92
APTX-230ENST00000494649 FAM76BQ5HYJ3 339 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 IL17RELQ6ZVW7 336 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 BIVMQ86UB2 503 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 FGFRL1Q8N441 504 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 PP6455Q8WZ26 134 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 AQP3Q92482 292 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 SLAMF9Q96A28 289 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 DNAJB11Q9UBS4 358 aa9.31□□□□□ -0.92
APTX-230ENST00000494649 MALRD1Q5VYJ5 2156 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 MAGEA13PA6NCF6 341 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 OOEPA6NGQ2 149 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 INAFM1C9JVW0 142 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 ANGPTL7O43827 346 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 FOSL1P15407 271 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 ATF1P18846 271 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 GLRA1P23415 457 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 CEBPDP49716 269 aaPredicted RBP9.3□□□□□ -0.92
APTX-230ENST00000494649 SNU13P55769 128 aaKnown RBP9.3□□□□□ -0.92
APTX-230ENST00000494649 MTCP1P56278 107 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 CNN3Q15417 329 aaKnown RBP9.3□□□□□ -0.92
APTX-230ENST00000494649 ZNF181Q2M3W8 571 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 ZNF404Q494X3 552 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 FAM27D1Q5T7N8 215 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 CYB5R2Q6BCY4 276 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 SLC25A26Q70HW3 274 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 SATL1Q86VE3 508 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 SERPINA12Q8IW75 414 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 RPS4Y2Q8TD47 263 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 TLNRD1Q9H1K6 362 aa9.3□□□□□ -0.92
APTX-230ENST00000494649 ZCCHC4Q9H5U6 513 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms