RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ZDHHC8Q9ULC8 765 aa16.44■□□□□ 0.22
USP39-218ENST00000493829 FASNP49327 2511 aaKnown RBP16.44■□□□□ 0.22
USP39-218ENST00000493829 A0A1B0GWJ7 208 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 MEGF11A6BM72 1044 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 ALX3O95076 343 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 TNFSF4P23510 183 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 CDKN1AP38936 164 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 ZNF154Q13106 437 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 MPPED2Q15777 294 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 IDNKQ5T6J7 187 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 DTX2Q86UW9 622 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 OR4D6Q8NGJ1 314 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 DYNC2LI1Q8TCX1 351 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 TNFAIP8L1Q8WVP5 186 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 SLC25A46Q96AG3 418 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 MEGF10Q96KG7 1140 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 KCNK15Q9H427 330 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 TREM2Q9NZC2 230 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 NOTOA8MTQ0 251 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 ANGPTL7O43827 346 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 ALDOBP05062 364 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 RAB11BQ15907 218 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 C14orf79Q96F83 325 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 MS4A5Q9H3V2 200 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 LIME1Q9H400 295 aa16.43■□□□□ 0.22
USP39-218ENST00000493829 C3orf80F5H4A9 247 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 TMEM225BP0DP42 221 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 CD200P41217 278 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 PPOXP50336 477 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 CNPY1Q3B7I2 92 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 AWAT2Q6E213 333 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 ZNF826PQ6ZT77 177 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 MOGAT3Q86VF5 341 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 PNLDC1Q8NA58 520 aaKnown RBP16.42■□□□□ 0.22
USP39-218ENST00000493829 SPERTQ8NA61 448 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 SORCS2Q96PQ0 1159 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 CCL19Q99731 98 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 OR51I2Q9H344 312 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 ELL3Q9HB65 397 aaPredicted RBP16.42■□□□□ 0.22
USP39-218ENST00000493829 DECR2Q9NUI1 292 aa16.42■□□□□ 0.22
USP39-218ENST00000493829 MRPS28Q9Y2Q9 187 aaKnown RBP16.42■□□□□ 0.22
USP39-218ENST00000493829 hCG_1807616A0A1W2PRN6 198 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 LRP5LA4QPB2 252 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 IFITM5A6NNB3 132 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 SYNGR1O43759 233 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 HTR2CP28335 458 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 SRP9P49458 86 aaKnown RBP16.41■□□□□ 0.22
USP39-218ENST00000493829 RORCP51449 518 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 KRTAP10-9P60411 292 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 GMFBP60983 142 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 HOXA4Q00056 320 aaPredicted RBP16.41■□□□□ 0.22
USP39-218ENST00000493829 C20orf204Q6ZNR8 217 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 SLC25A26Q70HW3 274 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 LYPD6Q86Y78 171 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 SCCPDHQ8NBX0 429 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 SLAMF9Q96A28 289 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 CPNE2Q96FN4 548 aaPredicted RBP16.41■□□□□ 0.22
USP39-218ENST00000493829 DIRC2Q96SL1 478 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 SAP30LQ9HAJ7 183 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 C1orf123Q9NWV4 160 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 PMF1-BGLAPU3KQ54 211 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 CACNA1DQ01668 2161 aa16.41■□□□□ 0.22
USP39-218ENST00000493829 TMEM210A6NLX4 147 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 AIPO00170 330 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 SLC17A2O00624 439 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 CDIPTO14735 213 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 RHBDL1O75783 438 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 SSTR2P30874 369 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 ZP1P60852 638 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 MZT1Q08AG7 82 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 C1QL2Q7Z5L3 287 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 ZNF573Q86YE8 665 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 OR6M1Q8NGM8 313 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 OR10K1Q8NGX5 313 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 ZNF488Q96MN9 340 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 LIN7BQ9HAP6 207 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 IL19Q9UHD0 177 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 ING4Q9UNL4 249 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 ARFGEF3Q5TH69 2177 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 FBN2P35556 2912 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 J3QT63 122 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 CDC14BO60729 498 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 LY6HO94772 140 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 BMP4P12644 408 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 SNRPBP14678 240 aaKnown RBP16.4■□□□□ 0.22
USP39-218ENST00000493829 SOX6P35712 828 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 PTGFRP43088 359 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 PSMD7P51665 324 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 GLIPR1L1Q6UWM5 242 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 TGIF2LYQ8IUE0 185 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 FOXRED1Q96CU9 486 aaPredicted RBP16.4■□□□□ 0.22
USP39-218ENST00000493829 UQCC2Q9BRT2 126 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 EGLN1Q9GZT9 426 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 CCDC59Q9P031 241 aaKnown RBP16.4■□□□□ 0.22
USP39-218ENST00000493829 STEAP1Q9UHE8 339 aa16.4■□□□□ 0.22
USP39-218ENST00000493829 PAHP00439 452 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 HPXP02790 462 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 CD55P08174 381 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 ADH4P08319 380 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 CALCBP10092 127 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms