RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 RMI2Q96E14 147 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 ZIC5Q96T25 663 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 FAM103A1Q9BTL3 118 aaKnown RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 AICDAQ9GZX7 198 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 TOLLIPQ9H0E2 274 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 CLEC5AQ9NY25 188 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 AUP1Q9Y679 476 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 PPM1DO15297 605 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 GNG7O60262 68 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 CDC34P49427 236 aaPredicted RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 SUMO3P55854 103 aaPredicted RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 FBXO48Q5FWF7 155 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 MS4A13Q5J8X5 152 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 MRPL54Q6P161 138 aaKnown RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 CCBE1Q6UXH8 406 aaPredicted RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 TCF24Q7RTU0 167 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 KLHDC8AQ8IYD2 350 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 ADAD2Q8NCV1 583 aaKnown RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 C10orf71Q711Q0 1435 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 DIDO1Q9BTC0 2240 aaKnown RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 FZD9O00144 591 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 ARPC1BO15143 372 aaKnown RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 RER1O15258 196 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 PTNP21246 168 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 PTGFRP43088 359 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 FUT6P51993 359 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 TMEM128Q5BJH2 165 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 AFMIDQ63HM1 303 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 APOOLQ6UXV4 268 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 UBE2DNLQ8IWF7 75 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 ARL14EPQ8N8R7 260 aaPredicted RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 OR2Z1Q8NG97 314 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 OR4A5Q8NH83 315 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 CHAC1Q9BUX1 264 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 RNF39Q9H2S5 420 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 ZDHHC18Q9NUE0 388 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 LHX3Q9UBR4 397 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 WIPI2Q9Y4P8 454 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 DIP2CQ9Y2E4 1556 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 TLCD2A6NGC4 264 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 AP4M1O00189 453 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 SSSCA1O60232 199 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 SCRG1O75711 98 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 NFAT5O94916 1531 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 OR3A4PP47883 348 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 SNRPEP62304 92 aaKnown RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 SELENBP1Q13228 472 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 ZBTB37Q5TC79 503 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 PLBD1Q6P4A8 553 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 HOGA1Q86XE5 327 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 FAHD2AQ96GK7 314 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 C6orf106Q9H6K1 298 aaPredicted RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 IL36GQ9NZH8 169 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 FBXL2Q9UKC9 423 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 ELF5Q9UKW6 265 aaPredicted RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 TMED3Q9Y3Q3 217 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 FBXO24O75426 580 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 GUCA2AQ02747 115 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 CA13Q8N1Q1 262 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 LRTM2Q8N967 370 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 DOK1Q99704 481 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 PIMREGQ9BSJ6 248 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 RIMBP3CA6NJZ7 1639 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 RIMBP3BA6NNM3 1639 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 RIMBP3Q9UFD9 1639 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 OR4C46A6NHA9 309 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 PPP1R3DO95685 299 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 FAM106CPP0CH98 169 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 PAX1P15863 534 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 CLDN20P56880 219 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 TIFABQ6ZNK6 161 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 ARRDC1Q8N5I2 433 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 OR4P4Q8NGL7 312 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 SLC25A18Q9H1K4 315 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 TAAR3PQ9P1P4 343 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 A0A1B0GW15 77 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 PPIHO43447 177 aaKnown RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 PIRTP0C851 137 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 PSMB1P20618 241 aaKnown RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 MMP11P24347 488 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 DIO1P49895 249 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 PNLIPRP2P54317 469 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 POU3F1Q03052 451 aaPredicted RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 EDDM3AQ14507 147 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 DEFB134Q4QY38 66 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 SIRPB2Q5JXA9 342 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 MARCH8Q5T0T0 291 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 OR2G6Q5TZ20 316 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 ZNF66Q6ZN08 573 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 PP6455Q8WZ26 134 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 RBPMSQ93062 196 aaKnown RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 MAP1LC3AQ9H492 121 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 TMEM9BQ9NQ34 198 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.91□□□□□ -1.62
USF3-202ENST00000478658 PHLDA3Q9Y5J5 127 aa4.91□□□□□ -1.62
USF3-202ENST00000478658 TRBV9A0A0B4J1U6 114 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 TRAV17A0A0B4J275 112 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 A6NL46 340 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 OGG1O15527 345 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 ZNF25P17030 456 aaPredicted RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms