RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 NPY4RP50391 375 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 PAX2Q02962 417 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 KLHL22Q53GT1 634 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 TMEM244Q5VVB8 128 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 STUMQ69YW2 141 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 HAGHLQ6PII5 290 aaPredicted RBP10.74□□□□□ -0.69
COL5A1-206ENST00000465877 ZNF841Q6ZN19 808 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 C12orf43Q96C57 262 aaKnown RBP10.74□□□□□ -0.69
COL5A1-206ENST00000465877 SEH1LQ96EE3 360 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 MRI1Q9BV20 369 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 WDR13Q9H1Z4 485 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 OR51I2Q9H344 312 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 ISG20L2Q9H9L3 353 aaKnown RBP10.74□□□□□ -0.69
COL5A1-206ENST00000465877 FGF20Q9NP95 211 aaPredicted RBP10.74□□□□□ -0.69
COL5A1-206ENST00000465877 FRRS1LQ9P0K9 344 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 OPN4Q9UHM6 478 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 HSPE1-MOB4S4R3N1 261 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 A0A1B0GW55 424 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 IRGMA1A4Y4 181 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 NKX6-3A6NJ46 265 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 C22orf46C9J442 243 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 J3QT63 122 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 RHBDL1O75783 438 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 GATBO75879 557 aaKnown RBP10.73□□□□□ -0.69
COL5A1-206ENST00000465877 FSHBP01225 129 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 ISG15P05161 165 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 DUX4L2P0CJ85 424 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 DUX4L3P0CJ86 424 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 DUX4L4P0CJ87 422 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 DUX4L5P0CJ88 424 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 DUX4L6P0CJ89 424 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 DUX4L7P0CJ90 424 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 LIMS3P0CW19 117 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 LIMS4P0CW20 117 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 GLRA1P23415 457 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 HAAOP46952 286 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 CCR9P51686 369 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 SLC34A1Q06495 639 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 MRPL28Q13084 256 aaKnown RBP10.73□□□□□ -0.69
COL5A1-206ENST00000465877 SCGB2A2Q13296 93 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 ALKBH1Q13686 389 aaKnown RBP10.73□□□□□ -0.69
COL5A1-206ENST00000465877 DUX4L9Q6RFH8 374 aaPredicted RBP10.73□□□□□ -0.69
COL5A1-206ENST00000465877 BTNL3Q6UXE8 466 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 C8orf59Q8N0T1 100 aaPredicted RBP10.73□□□□□ -0.69
COL5A1-206ENST00000465877 OR10AC1Q8NH08 325 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 TRMT10AQ8TBZ6 339 aaKnown RBP10.73□□□□□ -0.69
COL5A1-206ENST00000465877 NPRL2Q8WTW4 380 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 AQP3Q92482 292 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 C10orf35Q96D05 121 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 SNTG1Q9NSN8 517 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 ERVK-18Q9QC07 812 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 DNAJB11Q9UBS4 358 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 DUX4Q9UBX2 424 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 ANK2Q01484 3957 aa10.73□□□□□ -0.69
COL5A1-206ENST00000465877 PQLC2LA1A4F0 135 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 OR4C45A6NMZ5 311 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 TNFRSF13BO14836 293 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-206ENST00000465877 ENSAO43768 121 aaKnown RBP10.72□□□□□ -0.69
COL5A1-206ENST00000465877 FCN3O75636 299 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 EPHA1P21709 976 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 AQP4P55087 323 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 CNN3Q15417 329 aaKnown RBP10.72□□□□□ -0.69
COL5A1-206ENST00000465877 ARMCX4Q5H9R4 360 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 SLC36A1Q7Z2H8 476 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 ZNF573Q86YE8 665 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 RDH10Q8IZV5 341 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 FAM216BQ8N7L0 139 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 ZNF676Q8N7Q3 588 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 OR51A4Q8NGJ6 313 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 NRG4Q8WWG1 115 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 RAB40AQ8WXH6 277 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 PP6455Q8WZ26 134 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 ADAT3Q96EY9 351 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-206ENST00000465877 CCL13Q99616 98 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 NUDT16L1Q9BRJ7 211 aaKnown RBP10.72□□□□□ -0.69
COL5A1-206ENST00000465877 KAAG1Q9UBP8 84 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 METRNQ9UJH8 293 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 HHLA2Q9UM44 414 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 DIMT1Q9UNQ2 313 aaKnown RBP10.72□□□□□ -0.69
COL5A1-206ENST00000465877 POLDIP2Q9Y2S7 368 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 AUP1Q9Y679 476 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 COL6A5A8TX70 2615 aa10.72□□□□□ -0.69
COL5A1-206ENST00000465877 E9PI62 339 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 H0YHG0 523 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 DVL1O14640 695 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 SYNGR1O43759 233 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 CCDC159P0C7I6 412 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 PGA5P0DJD9 388 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 ZNF20P17024 532 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 MYL12AP19105 171 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 MPZP25189 248 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 DCKP27707 260 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 TGM4P49221 684 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 ETV1P50549 477 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 UBE2V2Q15819 145 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 SMIM21Q3B7S5 101 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 CALHM1Q8IU99 346 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 EGFL6Q8IUX8 553 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 FGFRL1Q8N441 504 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 POC1AQ8NBT0 407 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms