RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 WNT10AQ9GZT5 417 aa13.98□□□□□ -0.17
HMGN1-209ENST00000463631 NIPAL2Q9H841 368 aa13.98□□□□□ -0.17
HMGN1-209ENST00000463631 ARMC1Q9NVT9 282 aa13.98□□□□□ -0.17
HMGN1-209ENST00000463631 RASL12Q9NYN1 266 aa13.98□□□□□ -0.17
HMGN1-209ENST00000463631 USE1Q9NZ43 259 aa13.98□□□□□ -0.17
HMGN1-209ENST00000463631 TCF19Q9Y242 345 aa13.98□□□□□ -0.17
HMGN1-209ENST00000463631 hCG_1809904A0A1W2PP81 198 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 A0A1W2PPE2 198 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 A0A1W2PR64 198 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 A0A1W2PRV1 198 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 OR5B21A6NL26 309 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 CCNB2O95067 398 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 SOX14O95416 240 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 LYNP07948 512 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 LGALS4P56470 323 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 RPL31P62899 125 aaKnown RBP13.97□□□□□ -0.17
HMGN1-209ENST00000463631 HABP2Q14520 560 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-209ENST00000463631 SMIM21Q3B7S5 101 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 PGAM4Q8N0Y7 254 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 WFDC9Q8NEX5 89 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 OR8B12Q8NGG6 310 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 ZNF671Q8TAW3 534 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 AQP3Q92482 292 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 FOXRED1Q96CU9 486 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-209ENST00000463631 HIST1H2AAQ96QV6 131 aa13.97□□□□□ -0.17
HMGN1-209ENST00000463631 NKX3-1Q99801 234 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-209ENST00000463631 CITED2Q99967 270 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-209ENST00000463631 FAM183AA6NL82 134 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 FAHP16930 419 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 MSX2P35548 267 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-209ENST00000463631 CAPZA1P52907 286 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 ERVFRD-1P60508 538 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 CNN3Q15417 329 aaKnown RBP13.96□□□□□ -0.17
HMGN1-209ENST00000463631 CEACAM21Q3KPI0 293 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 SPATS1Q496A3 300 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 VAX1Q5SQQ9 334 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 FOXB2Q5VYV0 432 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 TMEM200BQ69YZ2 307 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.96□□□□□ -0.17
HMGN1-209ENST00000463631 ZNF561Q8N587 486 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 YY1AP1Q9H869 796 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 MED20Q9H944 212 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 PITPNC1Q9UKF7 332 aa13.96□□□□□ -0.17
HMGN1-209ENST00000463631 TBL2Q9Y4P3 447 aaKnown RBP13.96□□□□□ -0.17
HMGN1-209ENST00000463631 A0A0U1RQV5 110 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 A6NDX4 124 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 ODF3BA8MYP8 253 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 ZNF732B4DXR9 585 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 SLC1A7O00341 560 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 COX7A1P24310 79 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 MAP2K3P46734 347 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 CCBE1Q6UXH8 406 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-209ENST00000463631 CD300LDQ6UXZ3 194 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 ACP7Q6ZNF0 438 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 LHFPL4Q7Z7J7 247 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 CALHM1Q8IU99 346 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 DYNAPQ8N1N2 210 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 POC1AQ8NBT0 407 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 OR5A2Q8NGI9 324 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 RPS4Y2Q8TD47 263 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 PRSS22Q9GZN4 317 aa13.95□□□□□ -0.18
HMGN1-209ENST00000463631 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.95□□□□□ -0.18
HMGN1-209ENST00000463631 RBP4P02753 201 aa13.94□□□□□ -0.18
HMGN1-209ENST00000463631 ATP6V1B1P15313 513 aa13.94□□□□□ -0.18
HMGN1-209ENST00000463631 DYNLT3P51808 116 aa13.94□□□□□ -0.18
HMGN1-209ENST00000463631 DLX6P56179 175 aa13.94□□□□□ -0.18
HMGN1-209ENST00000463631 MICAQ29983 383 aa13.94□□□□□ -0.18
HMGN1-209ENST00000463631 CEP78Q5JTW2 689 aa13.94□□□□□ -0.18
HMGN1-209ENST00000463631 ZBTB37Q5TC79 503 aa13.94□□□□□ -0.18
HMGN1-209ENST00000463631 HAGHLQ6PII5 290 aaPredicted RBP13.94□□□□□ -0.18
HMGN1-209ENST00000463631 CD177Q8N6Q3 437 aa13.94□□□□□ -0.18
HMGN1-209ENST00000463631 FAM81AQ8TBF8 368 aa13.94□□□□□ -0.18
HMGN1-209ENST00000463631 TEX47Q8TBZ9 253 aa13.94□□□□□ -0.18
HMGN1-209ENST00000463631 DSCAML1Q8TD84 2053 aa13.94□□□□□ -0.18
HMGN1-209ENST00000463631 ACOD1A6NK06 481 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 RFPL4AA6NLU0 287 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 C17orf98A8MV24 154 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 RFPL4AL1F8VTS6 287 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 PRODHO43272 600 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 SELENOFO60613 162 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 NOS1APO75052 506 aaPredicted RBP13.93□□□□□ -0.18
HMGN1-209ENST00000463631 PGA5P0DJD9 388 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 CCL3L1P16619 93 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 ZNF273Q14593 569 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 TRPM8Q7Z2W7 1104 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 MALSU1Q96EH3 234 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 CDRT15Q96T59 188 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 ABCB10Q9NRK6 738 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 VNN3Q9NY84 501 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 KLHDC2Q9Y2U9 406 aa13.93□□□□□ -0.18
HMGN1-209ENST00000463631 PEX14O75381 377 aa13.92□□□□□ -0.18
HMGN1-209ENST00000463631 IGLV3-1P01715 115 aa13.92□□□□□ -0.18
HMGN1-209ENST00000463631 ALDOBP05062 364 aa13.92□□□□□ -0.18
HMGN1-209ENST00000463631 CD33P20138 364 aa13.92□□□□□ -0.18
HMGN1-209ENST00000463631 PRDX2P32119 198 aa13.92□□□□□ -0.18
HMGN1-209ENST00000463631 ZNF626Q68DY1 528 aa13.92□□□□□ -0.18
HMGN1-209ENST00000463631 ZNF782Q6ZMW2 699 aaPredicted RBP13.92□□□□□ -0.18
HMGN1-209ENST00000463631 IQCF1Q8N6M8 205 aa13.92□□□□□ -0.18
HMGN1-209ENST00000463631 OR11H6Q8NGC7 330 aa13.92□□□□□ -0.18
HMGN1-209ENST00000463631 OR2T27Q8NH04 317 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms